xbp1 (Takifugu rubripes)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSTRUG00000016185 T061695_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
XBP1
M02825_2.00 		Homo sapiens
GVTGACGTCABB
VVTGACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_1 		0.849 0.797
XBP1
M02826_2.00 		Homo sapiens
GVTGACGTGKCVHW
WDBGMCACGTCABC		 SELEX
Jolma et al.(2013)
XBP1_2 		0.849 0.797
XBP1
M02730_2.00 		Homo sapiens
GACGTGKCNNW
WNNGMCACGTC		 SELEX
Jolma et al.(2010)
XBP1_monomer 		0.849 0.797
XBP1
M04231_2.00 		Homo sapiens
NVTGACGTGKNN
NNMCACGTCABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1 		0.849 0.797
XBP1
M04232_2.00 		Homo sapiens
NVTKACGTMABV
BVTKACGTMABN		 SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2 		0.849 0.797
XBP1
M04010_2.00 		Homo sapiens
GRTGACGTGKCV
BGMCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1 		0.849 0.797
XBP1
M04011_2.00 		Homo sapiens
GRTGACGTCAYS
SRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2 		0.849 0.797
XBP1
M04012_2.00 		Homo sapiens
KGMCACGTGKMCH
DGKMCACGTGKCM		 SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3 		0.849 0.797
XBP1
M09932_2.00 		Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB
VDHHWDNDMCACGTCABYDHWNDN		 Transfac
Matys et al.(2006)
V$HTF_01 		0.849 0.797
XBP1
M09933_2.00 		Homo sapiens
DBRHTKACGTGKHNHWD
HWDNDMCACGTMADYVH		 Transfac
Matys et al.(2006)
V$XBP1_01 		0.849 0.797
XBP1
M04233_2.00 		Homo sapiens
BKMCACRTCAYS
SRTGAYGTGKMV		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1 		0.849 0.797
XBP1
M04234_2.00 		Homo sapiens
VVTGWCRTCAYS
SRTGAYGWCABB		 SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2 		0.849 0.797
Xbp1
M00757_2.00 		Mus musculus
NNHBAYDNNN
NNNHRTVDNN		 PBM
Weirauch et al.(2013)
pTH2852 		0.849 0.781
Xbp1
M01802_2.00 		Mus musculus
NHNACGYNN
NNRCGTNDN		 PBM
Weirauch et al.(2014)
pTH5019 		0.849 0.781
Xbp1
M08818_2.00 		Mus musculus
GACGTGKCMHWD
HWDKGMCACGTC		 Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C 		0.849 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000041380 bZIP 71 134
ENSTRUP00000041381 bZIP 71 134
ENSTRUP00000041382 bZIP 71 134
ENSTRUP00000041383 bZIP 71 134

Links

Other bZIP family TFs
Other Takifugu rubripes TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000011243 Ailuropoda melanoleuca ENSAMEG00000011243 I
ZKSCAN1 Bos taurus ENSBTAG00000016757 I
ZKSCAN1 Canis familiaris ENSCAFG00000031298 I
ZKSCAN1 Choloepus hoffmanni ENSCHOG00000008882 I
ENSCJAG00000015664 Callithrix jacchus ENSCJAG00000015664 I
ZKSCAN1 Cavia porcellus ENSCPOG00000005770 I
ENSCSAG00000017829 Chlorocebus sabaeus ENSCSAG00000017829 I
ENSDORG00000015914 Dipodomys ordii ENSDORG00000015914 I
ZKSCAN1 Equus caballus ENSECAG00000022801 I
ZKSCAN1 Erinaceus europaeus ENSEEUG00000006215 I
ZKSCAN1 Echinops telfairi ENSETEG00000002676 I
ZKSCAN1 Felis catus ENSFCAG00000003558 I
ZKSCAN1 Homo sapiens ENSG00000106261 D
ZKSCAN1 Loxodonta africana ENSLAFG00000015561 I
ENSMEUG00000006695 Macropus eugenii ENSMEUG00000006695 I
ZKSCAN1 Microcebus murinus ENSMICG00000003957 I
ZKSCAN1 Macaca mulatta ENSMMUG00000008601 I
ZKSCAN1 Monodelphis domestica ENSMODG00000004145 I
ENSMPUG00000010898 Mustela putorius furo ENSMPUG00000010898 I
Zkscan1 Mus musculus ENSMUSG00000029729 D
ENSNLEG00000011334 Nomascus leucogenys ENSNLEG00000011334 I
ENSOARG00000017971 Ovis aries ENSOARG00000017971 I
ZKSCAN1 Oryctolagus cuniculus ENSOCUG00000015333 I
ZKSCAN1 Otolemur garnettii ENSOGAG00000016308 I
ENSOPRG00000005191 Ochotona princeps ENSOPRG00000005191 I
ENSP00000323148 Macaca fascicularis ENSP00000323148 I
ENSPANG00000021727 Papio anubis ENSPANG00000021727 I
ZKSCAN1 Procavia capensis ENSPCAG00000005258 I
ENSPPYG00000017394 Pongo abelii ENSPPYG00000017394 I
ZKSCAN1 Pan troglodytes ENSPTRG00000019468 I
Zkscan1 Rattus norvegicus ENSRNOG00000001335 I
ZKSCAN1 Sorex araneus ENSSARG00000002353 I
ENSSHAG00000012439 Sarcophilus harrisii ENSSHAG00000012439 I
ENSSSCG00000007643 Sus scrofa ENSSSCG00000007643 I
ENSSTOG00000010173 Ictidomys tridecemlineatus ENSSTOG00000010173 I
ZKSCAN1 Tupaia belangeri ENSTBEG00000013785 I
ENSTSYG00000002021 Tarsius syrichta ENSTSYG00000002021 I
ZKSCAN1 Tursiops truncatus ENSTTRG00000012308 I
ZKSCAN1 Vicugna pacos ENSVPAG00000008160 I
Myotis_brandtii_ZKSCAN1_10002829 Myotis brandtii Myotis_brandtii_ZKSCAN1_10002829 I