CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM05G19350
(
Oryza glumaepatula
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
OGLUM05G19350
T065503_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA10
M06783_2.00
Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN
Dap-seq
OMalley et al.(2016)
TGA10_col_a
0.805
0.848
TGA10
M06784_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA10_colamp_a
0.805
0.848
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM05G19350.1
bZIP
258
306
DAKTERRLAQNREAARKSRLRKKAYVQQLETSRIRLQQIEQELQRARSQ
OGLUM05G19350.2
bZIP
243
291
DAKTERRLAQNREAARKSRLRKKAYVQQLETSRIRLQQIEQELQRARSQ
OGLUM05G19350.3
bZIP
258
320
DAKTERRLAQNREAARKSRLRKKAYVQQLETSRIRLQQIEQELQRARSQVPTLRKPHKIATSN
Links
Other
bZIP
family TFs
Other
Oryza glumaepatula
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_065800
Acremonium chrysogenum
ACRE_065800
N
fgenesh1_pm.sca_1_chr1_3_0000032
Nectria haematococca
fgenesh1_pm.sca_1_chr1_3_0000032
N
MAC_07154
Metarhizium acridum
MAC_07154
N
NCU09804
Neurospora crassa
NCU09804
N
NechaG89899
Fusarium solani
NechaG89899
N
VDBG_04863
Verticillium albo atrum
VDBG_04863
N
VDBG_04863
Verticillium alfalfae
VDBG_04863
N
VHEMI01120
Torrubiella hemipterigena
VHEMI01120
I
X797_005779
Metarhizium robertsii
X797_005779
N