Gorai.010G218700 (Gossypium raimondii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gorai.010G218700 T071977_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK00315.1
M01153_2.00 		Cannabis sativa
NNGACAGCTRN
NYAGCTGTCNN		 PBM
Lambert et al.(2019)
pTH10085 		0.818 0.935
PK16335.1
M01157_2.00 		Cannabis sativa
NNNNKACAGCTRN
NYAGCTGTMNNNN		 PBM
Lambert et al.(2019)
pTH10187 		0.818 0.935
AtbZIP52
M06746_2.00 		Arabidopsis thaliana
DTGMCAGCYBDNHH
DDNHVRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_colamp_a 		0.813 0.871
AtbZIP52
M06747_2.00 		Arabidopsis thaliana
DTGMCAGCYKDNHN
NDNHMRGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP52_col_v31 		0.813 0.871
BZIP18
M01777_2.00 		Arabidopsis thaliana
NDMCARNHNN
NNDNYTGKHN		 PBM
Weirauch et al.(2014)
pTH7316 		0.810 0.903
BZIP18
M06768_2.00 		Arabidopsis thaliana
DTGMCAGCTDD
HHAGCTGKCAH		 Dap-seq
OMalley et al.(2016)
bZIP18_colamp_a 		0.810 0.903
BZIP18
M06769_2.00 		Arabidopsis thaliana
TGMCAGCTKKN
NMMAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP18_col_v31 		0.810 0.903
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G218700.1 bZIP 161 222
Gorai.010G218700.2 bZIP 161 211
Gorai.010G218700.3 bZIP 161 222

Links

Other bZIP family TFs
Other Gossypium raimondii TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002363 Ricinus communis 29729.m002363 I 0.830
29804.m001495 Ricinus communis 29804.m001495 I 0.818
AtbZIP52 Arabidopsis lyrata Al_scaffold_0001_623 I 0.813
AMTR_s00077p00070990 Amborella trichopoda AMTR_s00077p00070990 I 0.818
Aquca_004_00525 Aquilegia coerulea Aquca_004_00525 I 0.818
Aquca_045_00222 Aquilegia coerulea Aquca_045_00222 I 0.837
AtbZIP52 Arabidopsis thaliana AT1G06850 D 0.813
BZIP18 Arabidopsis thaliana AT2G40620 D 0.810
BGIOSGA012577 Oryza indica BGIOSGA012577 I 0.818
BGIOSGA023710 Oryza indica BGIOSGA023710 I 0.818
Bo4g012700 Brassica oleracea Bo4g012700 I 0.810
Bo4g190320 Brassica oleracea Bo4g190320 I 0.836
Bo8g007220 Brassica oleracea Bo8g007220 I 0.813
Bo8g114410 Brassica oleracea Bo8g114410 I 0.813
Bostr.25219s0275 Boechera stricta Bostr.25219s0275 I 0.813
Bostr.9345s0072 Boechera stricta Bostr.9345s0072 I 0.810
Bra004582 Brassica rapa Bra004582 I 0.810
Bra016980 Brassica rapa Bra016980 I 0.836
Bra030663 Brassica rapa Bra030663 I 0.813
Bra031541 Brassica rapa Bra031541 I 0.813
Cagra.1642s0027 Capsella grandiflora Cagra.1642s0027 I 0.810
Cagra.1671s0308 Capsella grandiflora Cagra.1671s0308 I 0.813
Carubv10009673m.g Capsella rubella Carubv10009673m.g I 0.813
Carubv10025182m.g Capsella rubella Carubv10025182m.g I 0.810
cassava43674.valid.m1 Manihot esculenta cassava43674.valid.m1 I 0.811
Ca_08929 Cicer arietinum Ca_08929 I 0.818
Ca_15657 Cicer arietinum Ca_15657 I 0.818
Ciclev10032076m.g Citrus clementina Ciclev10032076m.g I 0.818
Cla007409 Citrullus lanatus Cla007409 I 0.818
Cla013626 Citrullus lanatus Cla013626 I 0.818
Cucsa.118900 Cucumis sativus Cucsa.118900 I 0.818
Cucsa.143950 Cucumis sativus Cucsa.143950 I 0.818
Eucgr.G03135 Eucalyptus grandis Eucgr.G03135 I 0.837
Eucgr.J00119 Eucalyptus grandis Eucgr.J00119 I 0.837
evm.TU.supercontig_19.62 Carica papaya evm.TU.supercontig_19.62 I 0.830
evm.TU.supercontig_2.298 Carica papaya evm.TU.supercontig_2.298 I 0.818
F775_32183 Aegilops tauschii F775_32183 I 0.807
fgenesh2_kg.4__2179__AT2G40620.1 Arabidopsis lyrata fgenesh2_kg.4__2179__AT2G40620.1 I 0.810
gene21344-v1.0-hybrid Fragaria vesca gene21344-v1.0-hybrid I 0.818
gene28103-v1.0-hybrid Fragaria vesca gene28103-v1.0-hybrid I 0.813
GLYMA02G40270 Glycine max GLYMA02G40270 I 0.818
GLYMA11G30940 Glycine max GLYMA11G30940 I 0.818
GLYMA14G38460 Glycine max GLYMA14G38460 I 0.818
GLYMA18G05880 Glycine max GLYMA18G05880 I 0.818
Gorai.009G293600 Gossypium raimondii Gorai.009G293600 I 0.830
Gorai.011G209200 Gossypium raimondii Gorai.011G209200 I 0.830
GRMZM2G062391 Zea mays GRMZM2G062391 I 0.807
GRMZM2G151295 Zea mays GRMZM2G151295 I 0.818
GSMUA_Achr11G23650_001 Musa acuminata GSMUA_Achr11G23650_001 I 0.789
GSMUA_Achr2G18830_001 Musa acuminata GSMUA_Achr2G18830_001 I 0.818
GSMUA_AchrUn_randomG14020_001 Musa acuminata GSMUA_AchrUn_randomG14020_001 I 0.786
LPERR03G14390 Leersia perrieri LPERR03G14390 I 0.818
Lus10008605.g Linum usitatissimum Lus10008605.g I 0.818
Lus10009907.g Linum usitatissimum Lus10009907.g I 0.818
Lus10012881.g Linum usitatissimum Lus10012881.g I 0.830
Lus10030531.g Linum usitatissimum Lus10030531.g I 0.830
Lus10042211.g Linum usitatissimum Lus10042211.g I 0.818
MDP0000129203 Malus domestica MDP0000129203 I 0.818
MDP0000210251 Malus domestica MDP0000210251 I 0.818
MDP0000297791 Malus domestica MDP0000297791 I 0.807
MDP0000305387 Malus domestica MDP0000305387 I 0.807
mgf007830m Mimulus guttatus mgf007830m I 0.807
MLOC_44311 Hordeum vulgare MLOC_44311 I 0.818
MLOC_60045 Hordeum vulgare MLOC_60045 I 0.807
MTR_3g467120 Medicago truncatula MTR_3g467120 I 0.818
MTR_5g075390 Medicago truncatula MTR_5g075390 I 0.818
OBART07G26390 Oryza barthii OBART07G26390 I 0.818
OGLUM07G26420 Oryza glumaepatula OGLUM07G26420 I 0.818
OMERI03G14760 Oryza meridionalis OMERI03G14760 I 0.818
ONIVA03G17500 Oryza nivara ONIVA03G17500 I 0.818
ONIVA07G26100 Oryza nivara ONIVA07G26100 I 0.818
OPUNC03G15960 Oryza punctata OPUNC03G15960 I 0.818
OPUNC07G24840 Oryza punctata OPUNC07G24840 I 0.818
orange1.1g020026m.g Citrus sinensis orange1.1g020026m.g I 0.818
ORUFI03G17050 Oryza rufipogon ORUFI03G17050 I 0.818
RF2B Oryza sativa OS03G0336200 I 0.818
Pavir.Bb03755 Panicum virgatum Pavir.Bb03755 I 0.811
Pavir.Ib01574 Panicum virgatum Pavir.Ib01574 I 0.818
PGSC0003DMG400016651 Solanum tuberosum PGSC0003DMG400016651 I 0.837
PGSC0003DMG400027599 Solanum tuberosum PGSC0003DMG400027599 I 0.837
PK00315.1 Cannabis sativa PK00315.1 D 0.818
PK16335.1 Cannabis sativa PK16335.1 D 0.818
Pm000251 Prunus mume Pm000251 I 0.818
Pm019060 Prunus mume Pm019060 I 0.818
POPTR_0013s09350 Populus trichocarpa POPTR_0013s09350 I 0.853
POPTR_0013s15280 Populus trichocarpa POPTR_0013s15280 I 0.816
POPTR_0019s15040 Populus trichocarpa POPTR_0019s15040 I 0.818
PRUPE_ppa006097mg Prunus persica PRUPE_ppa006097mg I 0.818
PRUPE_ppa007645mg Prunus persica PRUPE_ppa007645mg I 0.818
SapurV1A.0182s0020 Salix purpurea SapurV1A.0182s0020 I 0.837
SapurV1A.0215s0230 Salix purpurea SapurV1A.0215s0230 I 0.818
SapurV1A.3480s0020 Salix purpurea SapurV1A.3480s0020 I 0.818
SapurV1A.4004s0010 Salix purpurea SapurV1A.4004s0010 I 0.837
Si030224m.g Setaria italica Si030224m.g I 0.811
Si036380m.g Setaria italica Si036380m.g I 0.818
Solyc06g048630.2 Solanum lycopersicum Solyc06g048630.2 I 0.837
TCM_042286 Theobroma cacao TCM_042286 I 0.818
TCM_045524 Theobroma cacao TCM_045524 I 0.811
Thhalv10008146m.g Eutrema salsugineum Thhalv10008146m.g I 0.813
Thhalv10016819m.g Eutrema salsugineum Thhalv10016819m.g I 0.810
Traes_2BS_1B0F27580 Triticum aestivum Traes_2BS_1B0F27580 I 0.815
Traes_2DS_93EAEC654 Triticum aestivum Traes_2DS_93EAEC654 I 0.818
Traes_4AS_45B416B25 Triticum aestivum Traes_4AS_45B416B25 I 0.807
Traes_4BL_9422485B3 Triticum aestivum Traes_4BL_9422485B3 I 0.807
Traes_4DL_19DC0CA31 Triticum aestivum Traes_4DL_19DC0CA31 I 0.807
AtbZIP52 Vitis vinifera VIT_06s0004g08070 I 0.818
VIT_13s0067g02900 Vitis vinifera VIT_13s0067g02900 I 0.837