Bra029148 (Brassica rapa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bra029148 T081950_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra029148.1-P C2H2 ZF 149 172

Links

Other C2H2 ZF family TFs
Other Brassica rapa TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_010_00624 Aquilegia coerulea Aquca_010_00624 N 0.817
AT5G52010 Arabidopsis thaliana AT5G52010 N 0.779
Bostr.15774s0347 Boechera stricta Bostr.15774s0347 N 0.779
cassava8973.m1 Manihot esculenta cassava8973.m1 N 0.759
cassava9166.m1 Manihot esculenta cassava9166.m1 N 0.759
Ca_09158 Cicer arietinum Ca_09158 N 0.817
chr5.CM0852.210.nc Lotus japonicus chr5.CM0852.210.nc N 0.817
Cla020960 Citrullus lanatus Cla020960 N 0.827
Cucsa.352460 Cucumis sativus Cucsa.352460 N 0.827
fgenesh1_pg.C_scaffold_8001227 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001227 N 0.779
Gorai.003G099900 Gossypium raimondii Gorai.003G099900 N 0.779
Gorai.010G022000 Gossypium raimondii Gorai.010G022000 N 0.779
GSMUA_Achr8G18570_001 Musa acuminata GSMUA_Achr8G18570_001 N 0.759
Lus10018728.g Linum usitatissimum Lus10018728.g N 0.807
Lus10024807.g Linum usitatissimum Lus10024807.g N 0.807
PK24307.1 Cannabis sativa PK24307.1 N 0.817
POPTR_0014s02520 Populus trichocarpa POPTR_0014s02520 N 0.827
SapurV1A.0423s0190 Salix purpurea SapurV1A.0423s0190 N 0.827
SapurV1A.2355s0020 Salix purpurea SapurV1A.2355s0020 N 0.827
SELMODRAFT_23691 Selaginella moellendorffii SELMODRAFT_23691 N 0.757
SELMODRAFT_56696 Selaginella moellendorffii SELMODRAFT_56696 N 0.757