CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK24307.1
(
Cannabis sativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PK24307.1
T144916_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK24307.1
C2H2 ZF
155
178
YVCNVCGRKCKTNLDLKKHFKQLH
Links
Other
C2H2 ZF
family TFs
Other
Cannabis sativa
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_010_00624
Aquilegia coerulea
Aquca_010_00624
N
0.827
Bra029148
Brassica rapa
Bra029148
N
0.817
POPTR_0014s02520
Populus trichocarpa
POPTR_0014s02520
N
0.817
Ca_09158
Cicer arietinum
Ca_09158
N
0.817
Cla020960
Citrullus lanatus
Cla020960
N
0.817
Cucsa.352460
Cucumis sativus
Cucsa.352460
N
0.817
SapurV1A.0423s0190
Salix purpurea
SapurV1A.0423s0190
N
0.817
SapurV1A.2355s0020
Salix purpurea
SapurV1A.2355s0020
N
0.817
chr5.CM0852.210.nc
Lotus japonicus
chr5.CM0852.210.nc
N
0.817
Lus10018728.g
Linum usitatissimum
Lus10018728.g
N
0.797
Lus10024807.g
Linum usitatissimum
Lus10024807.g
N
0.797
AT5G52010
Arabidopsis thaliana
AT5G52010
N
0.769
fgenesh1_pg.C_scaffold_8001227
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8001227
N
0.769
Bostr.15774s0347
Boechera stricta
Bostr.15774s0347
N
0.769
Gorai.003G099900
Gossypium raimondii
Gorai.003G099900
N
0.769
Gorai.010G022000
Gossypium raimondii
Gorai.010G022000
N
0.769
SELMODRAFT_23691
Selaginella moellendorffii
SELMODRAFT_23691
N
0.767
SELMODRAFT_56696
Selaginella moellendorffii
SELMODRAFT_56696
N
0.767