chr5.CM0852.210.nc (Lotus japonicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 chr5.CM0852.210.nc T146072_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0852.210.nc C2H2 ZF 145 168

Links

Other C2H2 ZF family TFs
Other Lotus japonicus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_09158 Cicer arietinum Ca_09158 N 0.827
Bra029148 Brassica rapa Bra029148 N 0.817
POPTR_0014s02520 Populus trichocarpa POPTR_0014s02520 N 0.817
Cla020960 Citrullus lanatus Cla020960 N 0.817
Cucsa.352460 Cucumis sativus Cucsa.352460 N 0.817
Aquca_010_00624 Aquilegia coerulea Aquca_010_00624 N 0.817
SapurV1A.0423s0190 Salix purpurea SapurV1A.0423s0190 N 0.817
SapurV1A.2355s0020 Salix purpurea SapurV1A.2355s0020 N 0.817
PK24307.1 Cannabis sativa PK24307.1 N 0.817
Lus10018728.g Linum usitatissimum Lus10018728.g N 0.797
Lus10024807.g Linum usitatissimum Lus10024807.g N 0.797
AT5G52010 Arabidopsis thaliana AT5G52010 N 0.769
fgenesh1_pg.C_scaffold_8001227 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8001227 N 0.769
Bostr.15774s0347 Boechera stricta Bostr.15774s0347 N 0.769
Gorai.003G099900 Gossypium raimondii Gorai.003G099900 N 0.769
Gorai.010G022000 Gossypium raimondii Gorai.010G022000 N 0.769
SELMODRAFT_23691 Selaginella moellendorffii SELMODRAFT_23691 N 0.757
SELMODRAFT_56696 Selaginella moellendorffii SELMODRAFT_56696 N 0.757