CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE16858
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE16858
T085031_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE16858
C2H2 ZF
89
111
YECEDCHEMFAVKRELATHMRIH
CRE16858
C2H2 ZF
117
139
HSCTQCGKEFGTRQLLKKHWMWH
CRE16858
C2H2 ZF
145
167
HVCPHCNKAFFQKGHLTQHLMIH
CRE16858
C2H2 ZF
173
195
HECPQCHKTFIFKFDLNRHMKIH
CRE16858
C2H2 ZF
200
221
FSCLQCGRSFLKQVMLDEHHLK
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000281001
Angiostrongylus cantonensis
ACAC_0000281001
I
ANCCAN_12875
Ancylostoma caninum
ANCCAN_12875
I
CBG20858
Caenorhabditis briggsae
CBG20858
I
CBN17510
Caenorhabditis brenneri
CBN17510
I
CBN31453
Caenorhabditis brenneri
CBN31453
I
CGOC_0000285301
Cylicostephanus goldi
CGOC_0000285301
I
CJA18506
Caenorhabditis japonica
CJA18506
I
CRE26355
Caenorhabditis remanei
CRE26355
I
DICVIV_11545
Dictyocaulus viviparus
DICVIV_11545
I
HCOI02134900
Haemonchus contortus
HCOI02134900
I
NECAME_12942
Necator americanus
NECAME_12942
I
OESDEN_17669
Oesophagostomum dentatum
OESDEN_17669
I
OESDEN_24138
Oesophagostomum dentatum
OESDEN_24138
I
PTRK_0000042600
Parastrongyloides trichosuri
PTRK_0000042600
N
RSKR_0000405100
Rhabditophanes kr3021
RSKR_0000405100
N
SVUK_0001242901
Strongylus vulgaris
SVUK_0001242901
I
TELCIR_10199
Teladorsagia circumcincta
TELCIR_10199
I
madf-5
Caenorhabditis elegans
WBGene00007242
D