CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OESDEN_24138
(
Oesophagostomum dentatum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
OESDEN_24138
T252489_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
madf-5
M02276_2.00
Caenorhabditis elegans
NNDCCGGHNN
NNDCCGGHNN
PBM
Weirauch et al.(2014)
pTH9076
0.818
0.754
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OESDEN_24138
MADF
1
61
MERMRIWEKIAAAVDSNCSGDFAKKRWLQLRDRYRKELKTAIKQNFVTPVRWCYFSHLSWL
Links
Other
MADF
family TFs
Other
Oesophagostomum dentatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NECAME_12942
Necator americanus
NECAME_12942
I
0.962
ANCCAN_12875
Ancylostoma caninum
ANCCAN_12875
I
0.962
SVUK_0001242901
Strongylus vulgaris
SVUK_0001242901
I
0.961
CGOC_0000285301
Cylicostephanus goldi
CGOC_0000285301
I
0.959
OESDEN_17669
Oesophagostomum dentatum
OESDEN_17669
I
0.957
TELCIR_10199
Teladorsagia circumcincta
TELCIR_10199
I
0.953
HPLM_0001751701
Haemonchus placei
HPLM_0001751701
I
0.948
HCOI02134900
Haemonchus contortus
HCOI02134900
I
0.948
DICVIV_11545
Dictyocaulus viviparus
DICVIV_11545
I
0.942
ACAC_0000281001
Angiostrongylus cantonensis
ACAC_0000281001
I
0.934
CJA18506
Caenorhabditis japonica
CJA18506
I
0.818
madf-5
Caenorhabditis elegans
WBGene00007242
D
0.818
CBN17510
Caenorhabditis brenneri
CBN17510
I
0.818
CRE26355
Caenorhabditis remanei
CRE26355
I
0.818
CBN31453
Caenorhabditis brenneri
CBN31453
I
0.818
CBG20858
Caenorhabditis briggsae
CBG20858
I
0.816