CBG20858 (Caenorhabditis briggsae)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 CBG20858 T248069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
madf-5
M02276_2.00 		Caenorhabditis elegans
NNDCCGGHNN
NNDCCGGHNN		 PBM
Weirauch et al.(2014)
pTH9076 		0.955 0.976
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG20858 MADF 11 93

Links

Other MADF family TFs
Other Caenorhabditis briggsae TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN17510 Caenorhabditis brenneri CBN17510 I 0.955
CBN31453 Caenorhabditis brenneri CBN31453 I 0.955
CJA18506 Caenorhabditis japonica CJA18506 I 0.955
CRE26355 Caenorhabditis remanei CRE26355 I 0.955
madf-5 Caenorhabditis elegans WBGene00007242 D 0.955
OESDEN_17669 Oesophagostomum dentatum OESDEN_17669 I 0.870
ANCCAN_12875 Ancylostoma caninum ANCCAN_12875 I 0.857
CGOC_0000285301 Cylicostephanus goldi CGOC_0000285301 I 0.857
DICVIV_11545 Dictyocaulus viviparus DICVIV_11545 I 0.857
NECAME_12942 Necator americanus NECAME_12942 I 0.857
SVUK_0001242901 Strongylus vulgaris SVUK_0001242901 I 0.857
TELCIR_10199 Teladorsagia circumcincta TELCIR_10199 I 0.857
ACAC_0000281001 Angiostrongylus cantonensis ACAC_0000281001 I 0.846
HCOI02134900 Haemonchus contortus HCOI02134900 I 0.843
HPLM_0001751701 Haemonchus placei HPLM_0001751701 I 0.843
SSTP_0000526000 Strongyloides stercoralis SSTP_0000526000 N 0.839
PTRK_0000042600 Parastrongyloides trichosuri PTRK_0000042600 N 0.820
RSKR_0000405100 Rhabditophanes kr3021 RSKR_0000405100 N 0.820
SPAL_0000254800 Strongyloides papillosus SPAL_0000254800 N 0.820
SVE_0255600 Strongyloides venezuelensis SVE_0255600 N 0.820
OESDEN_24138 Oesophagostomum dentatum OESDEN_24138 I 0.816