CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0255600
(
Strongyloides venezuelensis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
SVE_0255600
T252584_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0255600.1
MADF
42
124
LIQKVREFPELYDQQQRACTDNVERTKIWDRIAFSIDSTIPGEFAKKRWLQMRDRYRKELKLALRDSFRYPPKWSYFKELTWL
Links
Other
MADF
family TFs
Other
Strongyloides venezuelensis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0000254800
Strongyloides papillosus
SPAL_0000254800
N
0.971
PTRK_0000042600
Parastrongyloides trichosuri
PTRK_0000042600
N
0.961
SSTP_0000526000
Strongyloides stercoralis
SSTP_0000526000
N
0.957
RSKR_0000405100
Rhabditophanes kr3021
RSKR_0000405100
N
0.950
L596_g1056
Steinernema carpocapsae
L596_g1056
N
0.857
L889_g5312
Steinernema feltiae
L889_g5312
N
0.857
L892_g27545
Steinernema scapterisci
L892_g27545
N
0.857
L893_g33788
Steinernema glaseri
L893_g33788
N
0.857
L898_g16521
Steinernema monticolum
L898_g16521
N
0.857
CBG20858
Caenorhabditis briggsae
CBG20858
I
0.820
Minc10867
Meloidogyne incognita
Minc10867
N
0.818
genemark-nMf.1.1.scaf07203-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf07203-processed-gene-0.2
N
0.818
MhA1_Contig800.frz3.gene8
Meloidogyne hapla
MhA1_Contig800.frz3.gene8
N
0.818
GPLIN_000491400
Globodera pallida
GPLIN_000491400
N
0.812