CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000491400
(
Globodera pallida
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
GPLIN_000491400
T251975_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000491400
MADF
22
102
LINEVRSHPQLYDQQHRVCTDNGERNAIWEVIASRIDDSVNGEFAKKRWLQMRDRYRKELKMALRTSVQPKWPYFTKLAWL
Links
Other
MADF
family TFs
Other
Globodera pallida
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BXY_0272200
Bursaphelenchus xylophilus
BXY_0272200
N
0.935
Minc10867
Meloidogyne incognita
Minc10867
N
0.929
MhA1_Contig800.frz3.gene8
Meloidogyne hapla
MhA1_Contig800.frz3.gene8
N
0.929
genemark-nMf.1.1.scaf07203-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf07203-processed-gene-0.2
N
0.929
RSKR_0000405100
Rhabditophanes kr3021
RSKR_0000405100
N
0.850
SVE_0255600
Strongyloides venezuelensis
SVE_0255600
N
0.812
SSTP_0000526000
Strongyloides stercoralis
SSTP_0000526000
N
0.812
PTRK_0000042600
Parastrongyloides trichosuri
PTRK_0000042600
N
0.812
SPAL_0000254800
Strongyloides papillosus
SPAL_0000254800
N
0.812