BCL11A (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000009226 T089377_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.827 1.000
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.827 1.000
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.827 1.000
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.806 0.947
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000016941 C2H2 ZF 18 41
ENSCJAP00000016941 C2H2 ZF 74 96
ENSCJAP00000016948 C2H2 ZF 413 434
ENSCJAP00000016948 C2H2 ZF 440 462
ENSCJAP00000016950 C2H2 ZF 344 365
ENSCJAP00000016950 C2H2 ZF 371 393
ENSCJAP00000016950 C2H2 ZF 708 730
ENSCJAP00000016950 C2H2 ZF 736 758
ENSCJAP00000016950 C2H2 ZF 766 789
ENSCJAP00000016959 C2H2 ZF 226 247
ENSCJAP00000016959 C2H2 ZF 253 275
ENSCJAP00000016959 C2H2 ZF 590 612
ENSCJAP00000016959 C2H2 ZF 618 640
ENSCJAP00000016959 C2H2 ZF 648 671
ENSCJAP00000016962 C2H2 ZF 378 399
ENSCJAP00000016962 C2H2 ZF 405 427
ENSCJAP00000049284 C2H2 ZF 378 399
ENSCJAP00000049284 C2H2 ZF 405 427
ENSCJAP00000049284 C2H2 ZF 742 764
ENSCJAP00000049284 C2H2 ZF 770 792
ENSCJAP00000049284 C2H2 ZF 800 823

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29681.m001315 Ricinus communis 29681.m001315 N 0.000
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.000
Bra025299 Brassica rapa Bra025299 I 0.000
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.000
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.000
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.000
cassava33974.m1 Manihot esculenta cassava33974.m1 I 0.000
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.000
Ca_17087 Cicer arietinum Ca_17087 I 0.000
Ca_17294 Cicer arietinum Ca_17294 I 0.000
Ca_19427 Cicer arietinum Ca_19427 I 0.000
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.000
F775_22212 Aegilops tauschii F775_22212 I 0.000
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.000
GLYMA03G15870 Glycine max GLYMA03G15870 N 0.000
GLYMA03G15930 Glycine max GLYMA03G15930 N 0.000
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.000
GLYMA06G19280 Glycine max GLYMA06G19280 I 0.000
GLYMA16G07927 Glycine max GLYMA16G07927 I 0.000
GLYMA19G13923 Glycine max GLYMA19G13923 I 0.000
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.000
Gorai.001G263600 Gossypium raimondii Gorai.001G263600 I 0.000
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.000
GRMZM2G302549 Zea mays GRMZM2G302549 I 0.000
GRMZM5G870592 Zea mays GRMZM5G870592 I 0.000
GSMUA_Achr3G19490_001 Musa acuminata GSMUA_Achr3G19490_001 I 0.000
GSMUA_Achr6G06490_001 Musa acuminata GSMUA_Achr6G06490_001 I 0.000
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.000
LPERR12G04190 Leersia perrieri LPERR12G04190 I 0.000
MDP0000199939 Malus domestica MDP0000199939 I 0.000
MTR_3g077650 Medicago truncatula MTR_3g077650 I 0.000
MTR_5g049190 Medicago truncatula MTR_5g049190 I 0.000
MTR_7g037260 Medicago truncatula MTR_7g037260 I 0.000
OB06G13860 Oryza brachyantha OB06G13860 I 0.000
OBART06G04170 Oryza barthii OBART06G04170 I 0.000
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.000
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.000
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.000
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.000
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.000
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.000
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.000
OS06G0162700 Oryza sativa OS06G0162700 I 0.000
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.000
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.000
Pavir.J25000 Panicum virgatum Pavir.J25000 I 0.000
Pavir.J37434 Panicum virgatum Pavir.J37434 I 0.000
Pm024743 Prunus mume Pm024743 I 0.000
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.000
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.000
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.000
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.000
Sb01g005100 Sorghum bicolor Sb01g005100 I 0.000
Si039046m.g Setaria italica Si039046m.g I 0.000
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.000
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.000
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.000
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.000
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.000