osr2 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000003524 T095561_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.827 1.000
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.811 0.986
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.811 0.986
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.811 0.986
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.811 0.986
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000004612 C2H2 ZF 171 193
ENSGACP00000004612 C2H2 ZF 199 221
ENSGACP00000004612 C2H2 ZF 227 249

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA025611 Oryza indica BGIOSGA025611 N 0.000
F775_15025 Aegilops tauschii F775_15025 N 0.000
F775_15026 Aegilops tauschii F775_15026 N 0.000
F775_15149 Aegilops tauschii F775_15149 N 0.000
F775_28763 Aegilops tauschii F775_28763 N 0.000
MLOC_51469 Hordeum vulgare MLOC_51469 N 0.000
MLOC_53626 Hordeum vulgare MLOC_53626 N 0.000
MLOC_53627 Hordeum vulgare MLOC_53627 N 0.000
MLOC_53628 Hordeum vulgare MLOC_53628 N 0.000
OGLUM05G09300 Oryza glumaepatula OGLUM05G09300 N 0.000
OLONG_021317 Oryza longistaminata OLONG_021317 N 0.000
ONIVA04G07260 Oryza nivara ONIVA04G07260 N 0.000
ORGLA07G0107400 Oryza glaberrima ORGLA07G0107400 N 0.000
ORUFI07G12800 Oryza rufipogon ORUFI07G12800 N 0.000
OS07G0443500 Oryza sativa OS07G0443500 N 0.000
Pavir.Ca00951 Panicum virgatum Pavir.Ca00951 N 0.000
Pavir.J09915 Panicum virgatum Pavir.J09915 N 0.000
Pavir.J28254 Panicum virgatum Pavir.J28254 N 0.000
Si024486m.g Setaria italica Si024486m.g N 0.000
Traes_1AL_6A75A61AC Triticum aestivum Traes_1AL_6A75A61AC N 0.000
Traes_1BL_0C01933E1 Triticum aestivum Traes_1BL_0C01933E1 N 0.000
Traes_1BL_119609AE8 Triticum aestivum Traes_1BL_119609AE8 N 0.000
Traes_1BL_5E492444E Triticum aestivum Traes_1BL_5E492444E N 0.000
Traes_1DL_10172C13A Triticum aestivum Traes_1DL_10172C13A N 0.000
TRIUR3_01735 Triticum urartu TRIUR3_01735 N 0.000
TRIUR3_06411 Triticum urartu TRIUR3_06411 N 0.000
TRIUR3_26254 Triticum urartu TRIUR3_26254 N 0.000
TRIUR3_26255 Triticum urartu TRIUR3_26255 N 0.000