CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zik1
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000030393
T101094_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZIK1
M07633_2.00
Homo sapiens
VNNWYBYNKTGCYWTTGYYHY
RDRRCAAWRGCAMNRVRWNNB
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZIK1.RCADE.ReprocessedData
0.808
0.932
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000032551
C2H2 ZF
215
237
YECSKCGKTFRGKYSLDQHQRVH
ENSMUSP00000032551
C2H2 ZF
243
265
WECRDCGKFFSQTSHLNDHRRIH
ENSMUSP00000032551
C2H2 ZF
271
293
YECSECGKLFRQNSSLVDHQKTH
ENSMUSP00000032551
C2H2 ZF
299
321
YECSQCGKSFSQKATLVKHKRVH
ENSMUSP00000032551
C2H2 ZF
327
349
YKCSECGNSFSQSAILNQHRRIH
ENSMUSP00000032551
C2H2 ZF
355
377
YECRECGKSFSQKATLIKHQRVH
ENSMUSP00000032551
C2H2 ZF
383
405
YKCSECGKSFSQSSILIQHRRIH
ENSMUSP00000032551
C2H2 ZF
411
433
YECSQCGKSFSQKSGLIQHQVVH
ENSMUSP00000032551
C2H2 ZF
439
461
YECDTCGNSFSQCSSLIHHQKCH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCJAG00000000037
Callithrix jacchus
ENSCJAG00000000037
I
0.812
ENSCSAG00000001627
Chlorocebus sabaeus
ENSCSAG00000001627
I
0.811
ZIK1
Homo sapiens
ENSG00000171649
D
0.808
ENSMICG00000007450
Microcebus murinus
ENSMICG00000007450
I
0.811
ZIK1
Macaca mulatta
ENSMMUG00000009292
I
0.812
ZIK1
Oryctolagus cuniculus
ENSOCUG00000029400
I
0.803
ENSP00000303820
Macaca fascicularis
ENSP00000303820
I
0.812
ENSPANG00000000290
Papio anubis
ENSPANG00000000290
I
0.812
ZIK1
Pan troglodytes
ENSPTRG00000011562
I
0.810
LOC100911224
Rattus norvegicus
ENSRNOG00000046455
I
0.825
Zik1
Rattus norvegicus
ENSRNOG00000055843
I
0.825
ENSTSYG00000008565
Tarsius syrichta
ENSTSYG00000008565
I
0.810