LOC100911224 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000046455 T109257_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZIK1
M07633_2.00 		Homo sapiens
VNNWYBYNKTGCYWTTGYYHY
RDRRCAAWRGCAMNRVRWNNB		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZIK1.RCADE.ReprocessedData 		0.807 0.932
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000066382 C2H2 ZF 212 234
ENSRNOP00000066382 C2H2 ZF 240 262
ENSRNOP00000066382 C2H2 ZF 268 290
ENSRNOP00000066382 C2H2 ZF 296 318
ENSRNOP00000066382 C2H2 ZF 324 346
ENSRNOP00000066382 C2H2 ZF 352 374
ENSRNOP00000066382 C2H2 ZF 380 402
ENSRNOP00000066382 C2H2 ZF 408 430
ENSRNOP00000066382 C2H2 ZF 436 458

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zik1 Rattus norvegicus ENSRNOG00000055843 I 0.827
Zik1 Mus musculus ENSMUSG00000030393 I 0.825
ENSCJAG00000000037 Callithrix jacchus ENSCJAG00000000037 I 0.811
ZIK1 Macaca mulatta ENSMMUG00000009292 I 0.811
ENSPANG00000000290 Papio anubis ENSPANG00000000290 I 0.811
ENSP00000303820 Macaca fascicularis ENSP00000303820 I 0.811
ENSCSAG00000001627 Chlorocebus sabaeus ENSCSAG00000001627 I 0.810
ENSMICG00000007450 Microcebus murinus ENSMICG00000007450 I 0.810
ENSTSYG00000008565 Tarsius syrichta ENSTSYG00000008565 I 0.809
ZIK1 Pan troglodytes ENSPTRG00000011562 I 0.808
ZIK1 Homo sapiens ENSG00000171649 D 0.807
ZIK1 Oryctolagus cuniculus ENSOCUG00000029400 I 0.801