CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF408
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000009225
T104528_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000008443
C2H2 ZF
309
331
YRCGECGKAFLQLCHLKKHAFVH
ENSOPRP00000008443
C2H2 ZF
337
359
FLCTECGKSYSSEESFKAHTLGH
ENSOPRP00000008443
C2H2 ZF
365
387
FPCPQCDKAYGTRRDLKEHQVVH
ENSOPRP00000008443
C2H2 ZF
393
415
FACDQCGKAFARRPSLRLHRKTH
ENSOPRP00000008443
C2H2 ZF
424
446
CPCPVCGRPLANQGSLRNHMRLH
ENSOPRP00000008443
C2H2 ZF
452
474
FLCPHCGRAFRQRGNLRGHLRVH
ENSOPRP00000008443
C2H2 ZF
480
502
HRCPHCTDAFSQLPELRRHLISH
ENSOPRP00000008443
C2H2 ZF
507
529
HLCPVCGKALRDPHTLRAHERLH
ENSOPRP00000008443
C2H2 ZF
535
557
FRCPQCGRSYTLATKLRRHLKSH
ENSOPRP00000008443
C2H2 ZF
563
585
YRCTTCGMGYTLPQSLKRHLLSH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
REM19
Arabidopsis thaliana
AT1G49480
D
0.000
Bo5g076230
Brassica oleracea
Bo5g076230
I
0.000
Bostr.26675s0223
Boechera stricta
Bostr.26675s0223
I
0.000
Bra014192
Brassica rapa
Bra014192
I
0.000
Bra032286
Brassica rapa
Bra032286
I
0.000
Cagra.4084s0003
Capsella grandiflora
Cagra.4084s0003
I
0.000
Carubv10010224m.g
Capsella rubella
Carubv10010224m.g
I
0.000
Gorai.013G039800
Gossypium raimondii
Gorai.013G039800
I
0.000
SapurV1A.0979s0040
Salix purpurea
SapurV1A.0979s0040
I
0.000
RTV1
Arabidopsis lyrata
scaffold_104641.1
I
0.000
Thhalv10012062m.g
Eutrema salsugineum
Thhalv10012062m.g
I
0.000