CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF48
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000007999
T107871_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000013671
C2H2 ZF
113
134
VCGECGKSFRQMSDLVKHQRTH
ENSPTRP00000013671
C2H2 ZF
140
162
YKCGVCGKGFGDSSARIKHQRTH
ENSPTRP00000013671
C2H2 ZF
192
214
TICGECGKSFRQSSDLVKHQRTH
ENSPTRP00000013671
C2H2 ZF
220
242
YKCGICGKGFGDSSARIKHQRTH
ENSPTRP00000013671
C2H2 ZF
275
297
YICTDCGKRFVLSCSLLSHQRSH
ENSPTRP00000013671
C2H2 ZF
303
325
FGCDVCGKEFARGSDLVKHLRVH
ENSPTRP00000013671
C2H2 ZF
331
353
YLCPECGKGFADSSARVKHLRTH
ENSPTRP00000013671
C2H2 ZF
359
381
HACPECDRTFSLSSTLLRHRLTH
ENSPTRP00000013671
C2H2 ZF
451
473
HKCPECGKGFRRSSDLVKHHRVH
ENSPTRP00000013671
C2H2 ZF
479
501
YLCPECGKGFADSSARVKHLRTH
ENSPTRP00000013671
C2H2 ZF
543
565
HVCGFCGKEFPRSSDLVKHRRTH
ENSPTRP00000013671
C2H2 ZF
571
593
YKCAECGKGFGDSSARIKHQRGH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29864.m001503
Ricinus communis
29864.m001503
N
30075.m001182
Ricinus communis
30075.m001182
N
30169.m006445
Ricinus communis
30169.m006445
I
HAP2A
Arabidopsis lyrata
Al_scaffold_0006_1178
N
AMTR_s00103p00144230
Amborella trichopoda
AMTR_s00103p00144230
I
AMTR_s00155p00071520
Amborella trichopoda
AMTR_s00155p00071520
N
NFYA1
Arabidopsis thaliana
AT5G12840
N
BGIOSGA010142
Oryza indica
BGIOSGA010142
N
BGIOSGA013378
Oryza indica
BGIOSGA013378
I
BGIOSGA024793
Oryza indica
BGIOSGA024793
N
BGIOSGA035818
Oryza indica
BGIOSGA035818
N
Bo2g010950
Brassica oleracea
Bo2g010950
N
Bo3g008860
Brassica oleracea
Bo3g008860
N
Bo5g105110
Brassica oleracea
Bo5g105110
I
Bo9g169310
Brassica oleracea
Bo9g169310
N
Bostr.2902s0020
Boechera stricta
Bostr.2902s0020
N
Bra006165
Brassica rapa
Bra006165
N
Bra008878
Brassica rapa
Bra008878
I
Bra023378
Brassica rapa
Bra023378
N
Bra031242
Brassica rapa
Bra031242
I
BRADI1G11800
Brachypodium distachyon
BRADI1G11800
I
BRADI1G13680
Brachypodium distachyon
BRADI1G13680
N
BRADI4G01380
Brachypodium distachyon
BRADI4G01380
N
Cagra.1535s0021
Capsella grandiflora
Cagra.1535s0021
N
Cagra.2117s0012
Capsella grandiflora
Cagra.2117s0012
N
Carubv10001701m.g
Capsella rubella
Carubv10001701m.g
N
Carubv10001713m.g
Capsella rubella
Carubv10001713m.g
N
cassava2144.valid.m1
Manihot esculenta
cassava2144.valid.m1
I
cassava29667.valid.m1
Manihot esculenta
cassava29667.valid.m1
I
cassava30668.valid.m1
Manihot esculenta
cassava30668.valid.m1
I
cassava36568.valid.m1
Manihot esculenta
cassava36568.valid.m1
I
cassava38260.valid.m1
Manihot esculenta
cassava38260.valid.m1
I
Ca_15574
Cicer arietinum
Ca_15574
I
Ciclev10005144m.g
Citrus clementina
Ciclev10005144m.g
I
Ciclev10015808m.g
Citrus clementina
Ciclev10015808m.g
I
Ciclev10016491m.g
Citrus clementina
Ciclev10016491m.g
N
Ciclev10032207m.g
Citrus clementina
Ciclev10032207m.g
N
Cla000845
Citrullus lanatus
Cla000845
N
Cla008690
Citrullus lanatus
Cla008690
N
Cla015490
Citrullus lanatus
Cla015490
I
Cucsa.124180
Cucumis sativus
Cucsa.124180
N
Cucsa.127910
Cucumis sativus
Cucsa.127910
I
CY34DRAFT_54046
Suillus luteus
CY34DRAFT_54046
I
estExt_fgenesh1_pg.C_420118
Physcomitrella patens
estExt_fgenesh1_pg.C_420118
N
estExt_fgenesh2_pg.C_Chr_130205
Micromonas sp RCC299
estExt_fgenesh2_pg.C_Chr_130205
N
Eucgr.A02381
Eucalyptus grandis
Eucgr.A02381
N
Eucgr.G03377
Eucalyptus grandis
Eucgr.G03377
N
Eucgr.J00764
Eucalyptus grandis
Eucgr.J00764
N
EuGene.0000150165
Micromonas pusilla
EuGene.0000150165
N
evm.TU.supercontig_125.6
Carica papaya
evm.TU.supercontig_125.6
I
evm.TU.supercontig_84.49
Carica papaya
evm.TU.supercontig_84.49
I
F775_07647
Aegilops tauschii
F775_07647
N
F775_09086
Aegilops tauschii
F775_09086
N
gene14681-v1.0-hybrid
Fragaria vesca
gene14681-v1.0-hybrid
I
GLYMA02G47380
Glycine max
GLYMA02G47380
N
GLYMA08G45030
Glycine max
GLYMA08G45030
I
GLYMA12G36540
Glycine max
GLYMA12G36540
I
GLYMA13G27230
Glycine max
GLYMA13G27230
I
GLYMA14G01360
Glycine max
GLYMA14G01360
N
GLYMA18G07890
Glycine max
GLYMA18G07890
I
Gorai.002G151800
Gossypium raimondii
Gorai.002G151800
I
Gorai.003G093300
Gossypium raimondii
Gorai.003G093300
I
Gorai.004G066000
Gossypium raimondii
Gorai.004G066000
I
Gorai.004G172100
Gossypium raimondii
Gorai.004G172100
I
Gorai.009G115000
Gossypium raimondii
Gorai.009G115000
N
Gorai.011G004400
Gossypium raimondii
Gorai.011G004400
N
Gorai.013G251200
Gossypium raimondii
Gorai.013G251200
N
GRMZM2G091964
Zea mays
GRMZM2G091964
I
GRMZM2G096016
Zea mays
GRMZM2G096016
N
GRMZM2G165488
Zea mays
GRMZM2G165488
N
GSMUA_Achr4G03600_001
Musa acuminata
GSMUA_Achr4G03600_001
N
GSMUA_Achr4G11090_001
Musa acuminata
GSMUA_Achr4G11090_001
I
GSMUA_Achr4G28390_001
Musa acuminata
GSMUA_Achr4G28390_001
N
GSMUA_Achr4G31420_001
Musa acuminata
GSMUA_Achr4G31420_001
N
GSMUA_Achr7G07860_001
Musa acuminata
GSMUA_Achr7G07860_001
N
LjSGA_007063.1
Lotus japonicus
LjSGA_007063.1
N
LPERR03G22840
Leersia perrieri
LPERR03G22840
N
LPERR03G25340
Leersia perrieri
LPERR03G25340
I
LPERR07G03140
Leersia perrieri
LPERR07G03140
N
LPERR12G16030
Leersia perrieri
LPERR12G16030
N
Lus10009944.g
Linum usitatissimum
Lus10009944.g
I
Lus10011326.g
Linum usitatissimum
Lus10011326.g
I
Lus10012202.g
Linum usitatissimum
Lus10012202.g
I
Lus10016411.g
Linum usitatissimum
Lus10016411.g
I
Lus10019708.g
Linum usitatissimum
Lus10019708.g
I
Lus10030137.g
Linum usitatissimum
Lus10030137.g
I
MDP0000129029
Malus domestica
MDP0000129029
N
MDP0000183865
Malus domestica
MDP0000183865
I
MDP0000375005
Malus domestica
MDP0000375005
N
MDP0000588222
Malus domestica
MDP0000588222
N
MDP0000785523
Malus domestica
MDP0000785523
N
MDP0000948645
Malus domestica
MDP0000948645
N
MLOC_76757
Hordeum vulgare
MLOC_76757
N
MTR_3g061510
Medicago truncatula
MTR_3g061510
N
MTR_8g037270
Medicago truncatula
MTR_8g037270
N
OB03G35340
Oryza brachyantha
OB03G35340
N
OB03G37700
Oryza brachyantha
OB03G37700
I
OB12G25960
Oryza brachyantha
OB12G25960
N
OBART03G30600
Oryza barthii
OBART03G30600
I
OBART12G19060
Oryza barthii
OBART12G19060
N
OGLUM02G35650
Oryza glumaepatula
OGLUM02G35650
N
OGLUM03G28230
Oryza glumaepatula
OGLUM03G28230
N
OGLUM03G30810
Oryza glumaepatula
OGLUM03G30810
I
OGLUM07G02990
Oryza glumaepatula
OGLUM07G02990
N
OGLUM12G20730
Oryza glumaepatula
OGLUM12G20730
N
OLONG_002491
Oryza longistaminata
OLONG_002491
N
OMERI03G24480
Oryza meridionalis
OMERI03G24480
N
OMERI03G26770
Oryza meridionalis
OMERI03G26770
I
OMERI07G18960
Oryza meridionalis
OMERI07G18960
N
OMERI12G13600
Oryza meridionalis
OMERI12G13600
N
ONIVA03G28530
Oryza nivara
ONIVA03G28530
N
ONIVA03G31950
Oryza nivara
ONIVA03G31950
I
ONIVA07G02150
Oryza nivara
ONIVA07G02150
N
ONIVA12G18060
Oryza nivara
ONIVA12G18060
N
OPUNC03G25190
Oryza punctata
OPUNC03G25190
N
OPUNC03G27900
Oryza punctata
OPUNC03G27900
I
OPUNC07G03530
Oryza punctata
OPUNC07G03530
N
OPUNC12G17240
Oryza punctata
OPUNC12G17240
N
orange1.1g017825m.g
Citrus sinensis
orange1.1g017825m.g
I
orange1.1g019036m.g
Citrus sinensis
orange1.1g019036m.g
I
orange1.1g019764m.g
Citrus sinensis
orange1.1g019764m.g
N
orange1.1g026474m.g
Citrus sinensis
orange1.1g026474m.g
N
ORGLA03G0280400
Oryza glaberrima
ORGLA03G0280400
I
ORGLA07G0030900
Oryza glaberrima
ORGLA07G0030900
N
ORGLA12G0163500
Oryza glaberrima
ORGLA12G0163500
N
ORUFI03G28690
Oryza rufipogon
ORUFI03G28690
N
ORUFI03G31840
Oryza rufipogon
ORUFI03G31840
I
ORUFI07G03340
Oryza rufipogon
ORUFI07G03340
N
ORUFI12G21270
Oryza rufipogon
ORUFI12G21270
N
OS03G0647600
Oryza sativa
OS03G0647600
N
OS03G0696300
Oryza sativa
OS03G0696300
I
OS07G0158500
Oryza sativa
OS07G0158500
N
OS12G0618600
Oryza sativa
OS12G0618600
N
Pavir.Ba03783
Panicum virgatum
Pavir.Ba03783
N
Pavir.Bb00319
Panicum virgatum
Pavir.Bb00319
N
Pavir.Cb00052
Panicum virgatum
Pavir.Cb00052
N
Pavir.Ia00780
Panicum virgatum
Pavir.Ia00780
I
Pavir.Ia01146
Panicum virgatum
Pavir.Ia01146
N
Pavir.Ib04124
Panicum virgatum
Pavir.Ib04124
N
Pavir.J08102
Panicum virgatum
Pavir.J08102
I
Pavir.J24924
Panicum virgatum
Pavir.J24924
N
PGSC0003DMG400006863
Solanum tuberosum
PGSC0003DMG400006863
I
PGSC0003DMG400008148
Solanum tuberosum
PGSC0003DMG400008148
N
PK00926.1
Cannabis sativa
PK00926.1
N
PK11147.1
Cannabis sativa
PK11147.1
I
PK21261.1
Cannabis sativa
PK21261.1
I
Pm012301
Prunus mume
Pm012301
I
POPTR_0001s27300
Populus trichocarpa
POPTR_0001s27300
N
POPTR_0006s05210
Populus trichocarpa
POPTR_0006s05210
I
POPTR_0009s06540
Populus trichocarpa
POPTR_0009s06540
N
POPTR_0016s05440
Populus trichocarpa
POPTR_0016s05440
I
PRUPE_ppa006634mg
Prunus persica
PRUPE_ppa006634mg
I
SapurV1A.0027s0420
Salix purpurea
SapurV1A.0027s0420
N
SapurV1A.0111s0280
Salix purpurea
SapurV1A.0111s0280
N
SapurV1A.0133s0410
Salix purpurea
SapurV1A.0133s0410
I
SapurV1A.2739s0010
Salix purpurea
SapurV1A.2739s0010
N
Sb01g011220
Sorghum bicolor
Sb01g011220
I
Sb01g013430
Sorghum bicolor
Sb01g013430
N
Sb02g003320
Sorghum bicolor
Sb02g003320
N
SELMODRAFT_38090
Selaginella moellendorffii
SELMODRAFT_38090
N
SELMODRAFT_438143
Selaginella moellendorffii
SELMODRAFT_438143
N
Si022607m.g
Setaria italica
Si022607m.g
N
Si032469m.g
Setaria italica
Si032469m.g
N
Si036465m.g
Setaria italica
Si036465m.g
N
Si037045m.g
Setaria italica
Si037045m.g
I
Solyc01g087240.2
Solanum lycopersicum
Solyc01g087240.2
I
Solyc10g079150.1
Solanum lycopersicum
Solyc10g079150.1
N
TCM_005875
Theobroma cacao
TCM_005875
I
TCM_024732
Theobroma cacao
TCM_024732
I
TCM_026909
Theobroma cacao
TCM_026909
N
TCM_040712
Theobroma cacao
TCM_040712
I
Thhalv10014364m.g
Eutrema salsugineum
Thhalv10014364m.g
N
Thhalv10021240m.g
Eutrema salsugineum
Thhalv10021240m.g
I
Traes_4AL_7C4C68FD0
Triticum aestivum
Traes_4AL_7C4C68FD0
I
Traes_4BS_B7B7EFF37
Triticum aestivum
Traes_4BS_B7B7EFF37
I
Traes_4DS_AFBE29C20
Triticum aestivum
Traes_4DS_AFBE29C20
I
Traes_5AL_047ABC9FC
Triticum aestivum
Traes_5AL_047ABC9FC
N
Traes_5AS_378F353CF
Triticum aestivum
Traes_5AS_378F353CF
N
Traes_5BL_B5F4BA2FD
Triticum aestivum
Traes_5BL_B5F4BA2FD
N
Traes_5BS_F1DE20B4B
Triticum aestivum
Traes_5BS_F1DE20B4B
N
Traes_5DL_7F3ABFDD6
Triticum aestivum
Traes_5DL_7F3ABFDD6
N
Traes_5DS_443F1993A
Triticum aestivum
Traes_5DS_443F1993A
N
TRIUR3_09920
Triticum urartu
TRIUR3_09920
I
TRIUR3_27732
Triticum urartu
TRIUR3_27732
N
TRIUR3_28596
Triticum urartu
TRIUR3_28596
N
VIT_08s0007g08250
Vitis vinifera
VIT_08s0007g08250
I
VIT_10s0003g04650
Vitis vinifera
VIT_10s0003g04650
N
VIT_13s0064g00860
Vitis vinifera
VIT_13s0064g00860
I