KLF3 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000015983 T108131_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLF3
M04418_2.00 		Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY		 SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX 		0.827 1.000
KLF3
M08876_2.00 		Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B 		0.827 1.000
Klf3
M08982_2.00 		Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A 		0.827 1.000
KLF3
M10172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3_01 		0.827 1.000
KLF3
M10173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3 		0.827 1.000
KLF3
M04419_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1 		0.827 1.000
KLF3
M04420_2.00 		Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2 		0.827 1.000
KLF5
M04410_2.00 		Homo sapiens
NMCACRCCCH
DGGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX 		0.804 0.855
KLF5
M08086_2.00 		Homo sapiens
BCCMCDCCCH
DGGGHGKGGV		 ChIP-seq
Mathelier et al.(2014)
MA0599.1 		0.804 0.855
KLF5
M08868_2.00 		Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN		 Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A 		0.804 0.855
Klf5
M08965_2.00 		Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM		 Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A 		0.804 0.855
KLF5
M09502_2.00 		Homo sapiens
GCCMCRCCCH
DGGGYGKGGC		 Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402 		0.804 0.855
KLF5
M10149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3_01 		0.804 0.855
KLF5
M10150_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3 		0.804 0.855
KLF5
M04411_2.00 		Homo sapiens
NMCACRCCYH
DRGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX 		0.804 0.855
Klf12
M00787_2.00 		Mus musculus
NNHMCRCCCH
DGGGYGKDNN		 PBM
Weirauch et al.(2013)
pTH0977 		0.801 0.942
Klf12
M02937_2.00 		Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC		 SELEX
Jolma et al.(2013)
Klf12_1 		0.801 0.942
KLF12
M04430_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX 		0.801 0.942
KLF12
M08299_2.00 		Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS		 ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME 		0.801 0.942
KLF12
M08879_2.00 		Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC		 Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C 		0.801 0.942
KLF12
M10186_2.00 		Homo sapiens
HMYACDG
CHGTRKD		 Transfac
Matys et al.(2006)
V$AP2REP_01 		0.801 0.942
KLF12
M04431_2.00 		Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1 		0.801 0.942
KLF12
M04432_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2 		0.801 0.942
Klf7
M00134_2.00 		Mus musculus
NHHMCRCCCH
DGGGYGKDDN		 PBM
Badis et al.(2009)
Klf7_0974 		0.797 0.826
KLF7
M08298_2.00 		Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB		 ChIP-seq
Schmitges et al.(2016)
O75840.MEME 		0.797 0.826
KLF4
M04463_2.00 		Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX 		0.784 0.826
KLF4
M08091_2.00 		Homo sapiens
MCACACCCWNN
NNWGGGTGTGK		 ChIP-seq
Mathelier et al.(2014)
MA0039.3 		0.784 0.826
Klf4
M08021_2.00 		Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB		 ChIP-seq
Chen et al.(2011)
SRP000217_Klf4 		0.784 0.826
KLF4
M08243_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF14 		0.784 0.826
KLF4
M08894_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A 		0.784 0.826
Klf4
M08964_2.00 		Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC		 Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A 		0.784 0.826
KLF4
M10217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_02 		0.784 0.826
KLF4
M10218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3_01 		0.784 0.826
KLF4
M10219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3 		0.784 0.826
KLF4
M10220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q4 		0.784 0.826
KLF4
M04464_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX 		0.784 0.826
KLF6
M04400_2.00 		Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN		 SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX 		0.781 0.826
KLF6
M08857_2.00 		Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A 		0.781 0.826
Klf6
M08962_2.00 		Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B 		0.781 0.826
KLF6
M10113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CPBP_Q6 		0.781 0.826
KLF6
M04401_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX 		0.781 0.826
luna
M03704_2.00 		Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY		 SELEX
Nitta et al.(2015)
luna_1 		0.781 0.812
KLF2
M04455_2.00 		Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX 		0.781 0.812
luna
M06163_2.00 		Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY		 B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765 		0.781 0.812
luna
M06164_2.00 		Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH		 B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765 		0.781 0.812
KLF2
M10210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q3 		0.781 0.812
KLF2
M10211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q6 		0.781 0.812
KLF2
M04456_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX 		0.781 0.812
KLF1
M00226_2.00 		Homo sapiens
CMCGCCCM
KGGGCGKG		 PBM
Barrera et al.(2016)
KLF1_REF 		0.768 0.783
KLF1
M08293_2.00 		Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN		 ChIP-seq
Schmitges et al.(2016)
Q13351.MEME 		0.768 0.783
KLF1
M08871_2.00 		Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS		 Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A 		0.768 0.783
KLF1
M10163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5_01 		0.768 0.783
KLF1
M10164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5 		0.768 0.783
KLF1
M00224_2.00 		Homo sapiens
YMCGCCCH
DGGGCGKR		 PBM
Barrera et al.(2016)
KLF1_H299Y 		0.768 0.768
Klf8
M00779_2.00 		Mus musculus
NNNMCRCCYN
NRGGYGKNNN		 PBM
Weirauch et al.(2013)
pTH3086 		0.766 0.870
KLF8
M08867_2.00 		Homo sapiens
CACMCMCKG
CMGKGKGTG		 Misc
Kulakovskiy et al.(2013)
KLF8_HUMAN.H11MO.0.C 		0.766 0.870
Klf8
M09000_2.00 		Mus musculus
CACMCMCKG
CMGKGKGTG		 Misc
Kulakovskiy et al.(2013)
KLF8_MOUSE.H11MO.0.C 		0.766 0.870
KLF8
M10147_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF8_Q5_01 		0.766 0.870
KLF8
M10148_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF8_Q5 		0.766 0.870
Klf1
M08099_2.00 		Mus musculus
NRCCACACCCW
WGGGTGTGGYN		 ChIP-seq
Mathelier et al.(2014)
MA0493.1 		0.765 0.768
Klf1
M09008_2.00 		Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK		 Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A 		0.765 0.768
Klf1
M09516_2.00 		Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH		 Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478 		0.765 0.768
dar1
M06171_2.00 		Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY		 B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454 		0.758 0.768
dar1
M06172_2.00 		Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN		 B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454 		0.758 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000027514 C2H2 ZF 260 284
ENSPTRP00000027514 C2H2 ZF 290 314
ENSPTRP00000027514 C2H2 ZF 320 342

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

736 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008660 Aedes aegypti AAEL008660 I
AALB002674 Anopheles albimanus AALB002674 I
AARA001906 Anopheles arabiensis AARA001906 I
AATE014019 Anopheles atroparvus AATE014019 I
ACEP14483 Atta cephalotes ACEP14483 I
ACHR004799 Anopheles christyi ACHR004799 I
ACOM034154 Anopheles coluzzii ACOM034154 I
ACUA004590 Anopheles culicifacies ACUA004590 I
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I
ADAC008497 Anopheles darlingi ADAC008497 I
ADIR010545 Anopheles dirus ADIR010545 I
AEPI006242 Anopheles epiroticus AEPI006242 I
AFAF002909 Anopheles farauti AFAF002909 I
AFUN008310 Anopheles funestus AFUN008310 I
AGAP001448 Anopheles gambiae AGAP001448 I
AMAM018725 Anopheles maculatus AMAM018725 I
AMEC009154 Anopheles melas AMEC009154 I
AMEM011331 Anopheles merus AMEM011331 I
AMIN003266 Anopheles minimus AMIN003266 I
AQUA006634 Anopheles quadriannulatus AQUA006634 I
ASIS019386 Anopheles sinensis ASIS019386 I
BGLB003958 Biomphalaria glabrata BGLB003958 I
CapteG59283 Capitella teleta CapteG59283 I
Cflo_06174--XP_001120620.1_APIME Camponotus floridanus Cflo_06174--XP_001120620.1_APIME I
CGI_10017809 Crassostrea gigas CGI_10017809 I
CLEC012470 Cimex lectularius CLEC012470 I
CPIJ006258 Culex quinquefasciatus CPIJ006258 I
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I
csin111295 Clonorchis sinensis csin111295 I
D915_00775 Fasciola hepatica D915_00775 I
D917_00545 Trichinella nativa D917_00545 I
D918_01499 Trichuris suis D918_01499 I
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I
EFV58245 Trichinella spiralis EFV58245 I
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I
PTF1A Anolis carolinensis ENSACAG00000008717 I
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I
PTF1A Bos taurus ENSBTAG00000047315 I
PTF1A Callithrix jacchus ENSCJAG00000007862 I
PTF1A Cavia porcellus ENSCPOG00000022828 I
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I
ptf1a Danio rerio ENSDARG00000014479 I
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I
PTF1A Equus caballus ENSECAG00000012711 I
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I
PTF1A Homo sapiens ENSG00000168267 D
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I
PTF1A Gorilla gorilla ENSGGOG00000015210 I
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I
PTF1A Loxodonta africana ENSLAFG00000012682 I
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I
PTF1A Myotis lucifugus ENSMLUG00000010122 I
PTF1A Monodelphis domestica ENSMODG00000008946 I
Ptf1a Mus musculus ENSMUSG00000026735 D
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I
PTF1A Otolemur garnettii ENSOGAG00000024685 I
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I
ptf1a Oryzias latipes ENSORLG00000008277 I
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I
PTF1A Procavia capensis ENSPCAG00000005440 I
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I
Ptf1a Rattus norvegicus ENSRNOG00000016902 I
PTF1A Sus scrofa ENSSSCG00000030662 I
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I
PTF1A Tupaia belangeri ENSTBEG00000005210 I
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I
ptf1a Takifugu rubripes ENSTRUG00000007713 I
PTF1A Tursiops truncatus ENSTTRG00000016843 I
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I
Fer1 Drosophila melanogaster FBgn0037475 D
GF17655 Drosophila ananassae FBgn0094673 I
GG13863 Drosophila erecta FBgn0106126 I
GH19006 Drosophila grimshawi FBgn0126473 I
GI23061 Drosophila mojavensis FBgn0145788 I
GL12422 Drosophila persimilis FBgn0150028 I
GM10936 Drosophila sechellia FBgn0165881 I
GD19915 Drosophila simulans FBgn0191398 I
GJ24574 Drosophila virilis FBgn0211653 I
GK14521 Drosophila willistoni FBgn0216527 I
GE24907 Drosophila yakuba FBgn0242002 I
GA27498 Drosophila pseudoobscura FBgn0248864 I
GB41913 Apis mellifera GB41913 I
HelroG86431 Helobdella robusta HelroG86431 I
HmN_000218700 Hymenolepis microstoma HmN_000218700 I
Hsal_01096--XP_001120922.1_APIME Harpegnathos saltator Hsal_01096--XP_001120922.1_APIME I
ISCW003737 Ixodes scapularis ISCW003737 I
KGM_14030 Danaus plexippus KGM_14030 I
L798_11980 Zootermopsis nevadensis L798_11980 I
LCUP002382 Lucilia cuprina LCUP002382 I
LDEC016362 Leptinotarsa decemlineata LDEC016362 I
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I
LotgiG66849 Lottia gigantea LotgiG66849 I
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I
MDOA013156 Musca domestica MDOA013156 I
MESCA008421 Megaselia scalaris MESCA008421 I
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I
PHUM498120 Pediculus humanus PHUM498120 I
PPAI005132 Phlebotomus papatasi PPAI005132 I
Pvit_04136 Pogona vitticeps Pvit_04136 I
RPRC001881 Rhodnius prolixus RPRC001881 I
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I
SMAR009985 Strigamia maritima SMAR009985 I
SMAR011911 Strigamia maritima SMAR011911 I
SMU15024587 Schmidtea mediterranea SMU15024587 I
SMU15028020 Schmidtea mediterranea SMU15028020 I
SMU15033768 Schmidtea mediterranea SMU15033768 I
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I
T265_12589 Opisthorchis viverrini T265_12589 I
TC014105 Tribolium castaneum TC014105 I
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I
ptf1a Xenopus tropicalis XB-GENE-484425 I
ptf1a.S Xenopus laevis XB-GENE-6466546 I
YQE_02105 Dendroctonus ponderosae YQE_02105 I