SROB_0001629701 (Schistosoma rodhaini)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SROB_0001629701 T055037_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PTF1A
M04156_2.00 		Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX 		0.870 0.904
PTF1A
M08736_2.00 		Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B 		0.870 0.904
Ptf1a
M08757_2.00 		Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A 		0.870 0.904
Ptf1a
M09470_2.00 		Mus musculus
NVVCASSTGB
VCASSTGBBN		 Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459 		0.870 0.904
PTF1A
M04157_2.00 		Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX 		0.870 0.904
Fer1
M03620_2.00 		Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB		 SELEX
Nitta et al.(2015)
Fer1_1 		0.870 0.865
Fer1
M05990_2.00 		Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD		 B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475 		0.870 0.865
Fer1
M05991_2.00 		Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW		 B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475 		0.870 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001629701-mRNA-1 bHLH 263 315

Links

Other bHLH family TFs
Other Schistosoma rodhaini TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
csin111295 Clonorchis sinensis csin111295 I 0.914
D915_00775 Fasciola hepatica D915_00775 I 0.914
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.914
T265_12589 Opisthorchis viverrini T265_12589 I 0.914
EFV58245 Trichinella spiralis EFV58245 I 0.894
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.894
SMU15028020 Schmidtea mediterranea SMU15028020 I 0.894
D917_00545 Trichinella nativa D917_00545 I 0.894
D918_01499 Trichuris suis D918_01499 I 0.894
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I 0.894
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I 0.894
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.892
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I 0.881
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.870
AAEL008660 Aedes aegypti AAEL008660 I 0.870
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.870
ADAC008497 Anopheles darlingi ADAC008497 I 0.870
AGAP001448 Anopheles gambiae AGAP001448 I 0.870
CGI_10017809 Crassostrea gigas CGI_10017809 I 0.870
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.870
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I 0.870
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.870
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.870
PTF1A Bos taurus ENSBTAG00000047315 I 0.870
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.870
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.870
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.870
ptf1a Danio rerio ENSDARG00000014479 I 0.870
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.870
PTF1A Equus caballus ENSECAG00000012711 I 0.870
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.870
PTF1A Homo sapiens ENSG00000168267 D 0.870
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.870
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.870
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.870
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.870
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.870
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.870
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.870
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.870
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.870
Ptf1a Mus musculus ENSMUSG00000026735 D 0.870
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.870
PTF1A Otolemur garnettii ENSOGAG00000024685 I 0.870
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.870
ptf1a Oryzias latipes ENSORLG00000008277 I 0.870
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.870
PTF1A Procavia capensis ENSPCAG00000005440 I 0.870
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.870
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.870
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.870
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.870
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.870
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.870
PTF1A Sus scrofa ENSSSCG00000030662 I 0.870
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.870
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.870
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.870
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.870
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.870
Fer1 Drosophila melanogaster FBgn0037475 D 0.870
GF17655 Drosophila ananassae FBgn0094673 I 0.870
GG13863 Drosophila erecta FBgn0106126 I 0.870
GH19006 Drosophila grimshawi FBgn0126473 I 0.870
GI23061 Drosophila mojavensis FBgn0145788 I 0.870
GL12422 Drosophila persimilis FBgn0150028 I 0.870
GM10936 Drosophila sechellia FBgn0165881 I 0.870
GD19915 Drosophila simulans FBgn0191398 I 0.870
GJ24574 Drosophila virilis FBgn0211653 I 0.870
GK14521 Drosophila willistoni FBgn0216527 I 0.870
GE24907 Drosophila yakuba FBgn0242002 I 0.870
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.870
HelroG86431 Helobdella robusta HelroG86431 I 0.870
ISCW003737 Ixodes scapularis ISCW003737 I 0.870
KGM_14030 Danaus plexippus KGM_14030 I 0.870
L798_11980 Zootermopsis nevadensis L798_11980 I 0.870
LotgiG66849 Lottia gigantea LotgiG66849 I 0.870
MESCA008421 Megaselia scalaris MESCA008421 I 0.870
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.870
PHUM498120 Pediculus humanus PHUM498120 I 0.870
RPRC001881 Rhodnius prolixus RPRC001881 I 0.870
SMAR009985 Strigamia maritima SMAR009985 I 0.870
SMAR011911 Strigamia maritima SMAR011911 I 0.870
TC014105 Tribolium castaneum TC014105 I 0.870
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.870
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.870
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.870
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.870
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.870
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.870
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.870
CLEC012470 Cimex lectularius CLEC012470 I 0.870
LCUP002382 Lucilia cuprina LCUP002382 I 0.870
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.870
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.870
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.870
AALB002674 Anopheles albimanus AALB002674 I 0.870
AARA001906 Anopheles arabiensis AARA001906 I 0.870
AATE014019 Anopheles atroparvus AATE014019 I 0.870
ACHR004799 Anopheles christyi ACHR004799 I 0.870
ACOM034154 Anopheles coluzzii ACOM034154 I 0.870
ACUA004590 Anopheles culicifacies ACUA004590 I 0.870
ADIR010545 Anopheles dirus ADIR010545 I 0.870
AEPI006242 Anopheles epiroticus AEPI006242 I 0.870
AFAF002909 Anopheles farauti AFAF002909 I 0.870
AFUN008310 Anopheles funestus AFUN008310 I 0.870
AMAM018725 Anopheles maculatus AMAM018725 I 0.870
AMEC009154 Anopheles melas AMEC009154 I 0.870
AMEM011331 Anopheles merus AMEM011331 I 0.870
AMIN003266 Anopheles minimus AMIN003266 I 0.870
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.870
ASIS019386 Anopheles sinensis ASIS019386 I 0.870
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.870
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.870
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.870
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.870
MDOA013156 Musca domestica MDOA013156 I 0.870
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.870
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I 0.870
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I 0.870
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.870
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I 0.870
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.869
SMU15033768 Schmidtea mediterranea SMU15033768 I 0.849
CapteG59283 Capitella teleta CapteG59283 I 0.846
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.846