PRDM6 (Tursiops truncatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTTRG00000006808 T113117_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000006439 C2H2 ZF 333 354
ENSTTRP00000006439 C2H2 ZF 361 383
ENSTTRP00000006439 C2H2 ZF 389 411
ENSTTRP00000006439 C2H2 ZF 417 438

Links

Other C2H2 ZF family TFs
Other Tursiops truncatus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_13991 Ancylostoma caninum ANCCAN_13991 I
ANCDUO_19569 Ancylostoma duodenale ANCDUO_19569 I
ASIM_0000241101 Anisakis simplex ASIM_0000241101 I
ASIM_0000264301 Anisakis simplex ASIM_0000264301 I
ASIM_0001608201 Anisakis simplex ASIM_0001608201 I
Bm2567 Brugia malayi Bm2567 D
BTMF_0001653601 Brugia timori BTMF_0001653601 I
BTMF_0001659501 Brugia timori BTMF_0001659501 I
BXY_0200700 Bursaphelenchus xylophilus BXY_0200700 I
BXY_0352300 Bursaphelenchus xylophilus BXY_0352300 I
CBG09413 Caenorhabditis briggsae CBG09413 D
CBN06605 Caenorhabditis brenneri CBN06605 D
CJA05020 Caenorhabditis japonica CJA05020 I
CJA05633_CONSTRUCT PBM CONSTRUCTS CJA05633_CONSTRUCT D
CJA37832 Caenorhabditis japonica CJA37832 I
CRE31027 Caenorhabditis remanei CRE31027 I
DME_0001004201 Dracunculus medinensis DME_0001004201 I
EEL_0000689901 Elaeophora elaphi EEL_0000689901 I
EVEC_0001123001 Enterobius vermicularis EVEC_0001123001 I
Hba_18605 Heterorhabditis bacteriophora Hba_18605 I
L596_g998 Steinernema carpocapsae L596_g998 I
L889_g10733 Steinernema feltiae L889_g10733 I
L892_g22881 Steinernema scapterisci L892_g22881 I
L892_g27879 Steinernema scapterisci L892_g27879 I
L893_g31098 Steinernema glaseri L893_g31098 I
L898_g30067 Steinernema monticolum L898_g30067 I
L898_g33808 Steinernema monticolum L898_g33808 I
LOAG_11460 Loa loa LOAG_11460 I
nAv.1.0.1.g01085 Acanthocheilonema viteae nAv.1.0.1.g01085 I
nAv.1.0.1.g09212 Acanthocheilonema viteae nAv.1.0.1.g09212 I
NBR_0000774001 Nippostrongylus brasiliensis NBR_0000774001 I
nDi.2.2.2.g08811 Dirofilaria immitis nDi.2.2.2.g08811 I
nDi.2.2.2.g10419 Dirofilaria immitis nDi.2.2.2.g10419 I
NECAME_07661 Necator americanus NECAME_07661 I
nLs.2.1.2.g05589 Litomosoides sigmodontis nLs.2.1.2.g05589 I
nOo.2.0.1.g05035 Onchocerca ochengi nOo.2.0.1.g05035 I
nOo.2.0.1.g12565 Onchocerca ochengi nOo.2.0.1.g12565 I
OESDEN_09202 Oesophagostomum dentatum OESDEN_09202 I
PTRK_0001597400 Parastrongyloides trichosuri PTRK_0001597400 I
SVE_0753200 Strongyloides venezuelensis SVE_0753200 I
SVE_1703300 Strongyloides venezuelensis SVE_1703300 I
TCLT_0000243901 Thelazia callipaeda TCLT_0000243901 I
TELCIR_05158 Teladorsagia circumcincta TELCIR_05158 I
dmd-10 Caenorhabditis elegans WBGene00007929 D
dmd-3 Caenorhabditis elegans WBGene00012832 D
WBGene00242643 Onchocerca volvulus WBGene00242643 I
WUBG_11979 Wuchereria bancrofti WUBG_11979 D