CBG09413 (Caenorhabditis briggsae)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 CBG09413 T168902_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG09413
M01924_2.00		 Caenorhabditis briggsae
AATGTTTC
GAAACATT		 PBM
Weirauch et al.(2014)
pTH8330		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBN06605
M01925_2.00 		Caenorhabditis brenneri
NWGTWKN
NMWACWN		 PBM
Weirauch et al.(2014)
pTH9247 		0.966 0.979
CJA05633_CONSTRUCT
M01936_2.00 		PBM CONSTRUCTS
NWGTWDN
NHWACWN		 PBM
Weirauch et al.(2014)
pTH9344 		0.966 0.957
dmd-10
M00657_2.00 		Caenorhabditis elegans
AWTGTTTC
GAAACAWT		 PBM
Narasimhan et al.(2015)
pTH9142 		0.966 0.979
WUBG_11979
M01922_2.00 		Wuchereria bancrofti
ATGTWTCA
TGAWACAT		 PBM
Weirauch et al.(2014)
pTH9296 		0.952 0.851
Bm2567
M01923_2.00 		Brugia malayi
NNNWGTTKHN
NDMAACWNNN		 PBM
Weirauch et al.(2014)
pTH9246 		0.952 0.851
dmd-3
M00658_2.00 		Caenorhabditis elegans
NNWGTWDN
NHWACWNN		 PBM
Narasimhan et al.(2015)
pTH10638 		0.918 0.745
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01924_2.00 DM 36 82

DNA Binding Domains

Protein ID Domain From To Sequence
CBG09413 DM 36 82

Links

Other DM family TFs
Other Caenorhabditis briggsae TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN06605 Caenorhabditis brenneri CBN06605 D 0.966
CRE31027 Caenorhabditis remanei CRE31027 I 0.966
dmd-10 Caenorhabditis elegans WBGene00007929 D 0.966
CJA05633_CONSTRUCT PBM CONSTRUCTS CJA05633_CONSTRUCT D 0.966
L893_g31098 Steinernema glaseri L893_g31098 I 0.963
L596_g998 Steinernema carpocapsae L596_g998 I 0.961
L889_g10733 Steinernema feltiae L889_g10733 I 0.961
L892_g22881 Steinernema scapterisci L892_g22881 I 0.961
L898_g33808 Steinernema monticolum L898_g33808 I 0.961
BXY_0200700 Bursaphelenchus xylophilus BXY_0200700 I 0.954
DME_0001004201 Dracunculus medinensis DME_0001004201 I 0.954
Hba_18605 Heterorhabditis bacteriophora Hba_18605 I 0.954
WUBG_11979 Wuchereria bancrofti WUBG_11979 D 0.952
Bm2567 Brugia malayi Bm2567 D 0.952
LOAG_11460 Loa loa LOAG_11460 I 0.952
WBGene00242643 Onchocerca volvulus WBGene00242643 I 0.952
ASIM_0001608201 Anisakis simplex ASIM_0001608201 I 0.952
BTMF_0001653601 Brugia timori BTMF_0001653601 I 0.952
EEL_0000689901 Elaeophora elaphi EEL_0000689901 I 0.952
EVEC_0001123001 Enterobius vermicularis EVEC_0001123001 I 0.952
nAv.1.0.1.g09212 Acanthocheilonema viteae nAv.1.0.1.g09212 I 0.952
NBR_0000774001 Nippostrongylus brasiliensis NBR_0000774001 I 0.952
nDi.2.2.2.g08811 Dirofilaria immitis nDi.2.2.2.g08811 I 0.952
nLs.2.1.2.g05589 Litomosoides sigmodontis nLs.2.1.2.g05589 I 0.952
nOo.2.0.1.g05035 Onchocerca ochengi nOo.2.0.1.g05035 I 0.952
TCLT_0000243901 Thelazia callipaeda TCLT_0000243901 I 0.952
PTRK_0001597400 Parastrongyloides trichosuri PTRK_0001597400 I 0.944
SPAL_0001233100 Strongyloides papillosus SPAL_0001233100 I 0.944
SVE_0753200 Strongyloides venezuelensis SVE_0753200 I 0.944
L892_g27879 Steinernema scapterisci L892_g27879 I 0.923
L898_g30067 Steinernema monticolum L898_g30067 I 0.923
CJA05020 Caenorhabditis japonica CJA05020 I 0.918
CJA37832 Caenorhabditis japonica CJA37832 I 0.918
dmd-3 Caenorhabditis elegans WBGene00012832 D 0.918
ANCCAN_13991 Ancylostoma caninum ANCCAN_13991 I 0.918
ANCDUO_19569 Ancylostoma duodenale ANCDUO_19569 I 0.918
NECAME_07661 Necator americanus NECAME_07661 I 0.918
TELCIR_05158 Teladorsagia circumcincta TELCIR_05158 I 0.918
ASIM_0000241101 Anisakis simplex ASIM_0000241101 I 0.916
ASIM_0000264301 Anisakis simplex ASIM_0000264301 I 0.916
OESDEN_09202 Oesophagostomum dentatum OESDEN_09202 I 0.911
BTMF_0001659501 Brugia timori BTMF_0001659501 I 0.910
nAv.1.0.1.g01085 Acanthocheilonema viteae nAv.1.0.1.g01085 I 0.910
nDi.2.2.2.g10419 Dirofilaria immitis nDi.2.2.2.g10419 I 0.910
nOo.2.0.1.g12565 Onchocerca ochengi nOo.2.0.1.g12565 I 0.910
BXY_0352300 Bursaphelenchus xylophilus BXY_0352300 I 0.884
SVE_1703300 Strongyloides venezuelensis SVE_1703300 I 0.883