ENSXMAG00000002453 (Xiphophorus maculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSXMAG00000002453 T113738_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.817 0.971
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.817 0.971
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.796 0.884
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.796 0.884
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.796 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000002450 C2H2 ZF 261 283
ENSXMAP00000002450 C2H2 ZF 289 311
ENSXMAP00000002450 C2H2 ZF 317 339
ENSXMAP00000002450 C2H2 ZF 345 367
ENSXMAP00000002450 C2H2 ZF 373 395
ENSXMAP00000002450 C2H2 ZF 401 424

Links

Other C2H2 ZF family TFs
Other Xiphophorus maculatus TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28976.m000155 Ricinus communis 28976.m000155 N 0.000
30131.m007078 Ricinus communis 30131.m007078 I 0.000
30138.m003866 Ricinus communis 30138.m003866 I 0.000
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I 0.000
ATBZIP42 Arabidopsis thaliana AT3G30530 D 0.000
BGIOSGA006734 Oryza indica BGIOSGA006734 I 0.000
BGIOSGA007649 Oryza indica BGIOSGA007649 I 0.000
Bo2g012800 Brassica oleracea Bo2g012800 I 0.000
Bo9g163740 Brassica oleracea Bo9g163740 I 0.000
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I 0.000
Bra008670 Brassica rapa Bra008670 I 0.000
Bra023540 Brassica rapa Bra023540 I 0.000
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I 0.000
Carubv10002068m.g Capsella rubella Carubv10002068m.g I 0.000
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I 0.000
cassava32522.m1 Manihot esculenta cassava32522.m1 I 0.000
cassava41140.m1 Manihot esculenta cassava41140.m1 I 0.000
cassava46237.m1 Manihot esculenta cassava46237.m1 I 0.000
cassava9577.m1 Manihot esculenta cassava9577.m1 I 0.000
Ca_15971 Cicer arietinum Ca_15971 N 0.000
Ca_17416 Cicer arietinum Ca_17416 I 0.000
chr2.CM0124.640.nd Lotus japonicus chr2.CM0124.640.nd I 0.000
Ciclev10013334m.g Citrus clementina Ciclev10013334m.g I 0.000
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I 0.000
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I 0.000
Ciclev10032777m.g Citrus clementina Ciclev10032777m.g I 0.000
Cla005975 Citrullus lanatus Cla005975 I 0.000
Cla016748 Citrullus lanatus Cla016748 I 0.000
Cla020641 Citrullus lanatus Cla020641 I 0.000
Cucsa.174700 Cucumis sativus Cucsa.174700 I 0.000
Cucsa.238410 Cucumis sativus Cucsa.238410 I 0.000
Cucsa.284240 Cucumis sativus Cucsa.284240 I 0.000
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I 0.000
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I 0.000
evm.TU.supercontig_53.3 Carica papaya evm.TU.supercontig_53.3 N 0.000
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I 0.000
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I 0.000
gene04504-v1.0-hybrid Fragaria vesca gene04504-v1.0-hybrid I 0.000
GLYMA01G09510 Glycine max GLYMA01G09510 I 0.000
GLYMA02G13960 Glycine max GLYMA02G13960 I 0.000
GLYMA04G01210 Glycine max GLYMA04G01210 I 0.000
GLYMA06G01240 Glycine max GLYMA06G01240 I 0.000
GLYMA11G12240 Glycine max GLYMA11G12240 I 0.000
GLYMA12G04440 Glycine max GLYMA12G04440 I 0.000
GLYMA19G05050 Glycine max GLYMA19G05050 I 0.000
Gorai.001G251000 Gossypium raimondii Gorai.001G251000 I 0.000
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I 0.000
Gorai.007G056900 Gossypium raimondii Gorai.007G056900 I 0.000
GRMZM2G098904 Zea mays GRMZM2G098904 I 0.000
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I 0.000
LPERR02G04950 Leersia perrieri LPERR02G04950 I 0.000
Lus10013059.g Linum usitatissimum Lus10013059.g I 0.000
Lus10029101.g Linum usitatissimum Lus10029101.g I 0.000
MDP0000183562 Malus domestica MDP0000183562 I 0.000
MDP0000261154 Malus domestica MDP0000261154 N 0.000
MDP0000863909 Malus domestica MDP0000863909 I 0.000
MDP0000891108 Malus domestica MDP0000891108 I 0.000
mgf003466m Mimulus guttatus mgf003466m I 0.000
mgf004063m Mimulus guttatus mgf004063m N 0.000
mgf017392m Mimulus guttatus mgf017392m I 0.000
mgf021986m Mimulus guttatus mgf021986m I 0.000
MTR_7g029400 Medicago truncatula MTR_7g029400 I 0.000
MTR_8g015250 Medicago truncatula MTR_8g015250 I 0.000
OBART02G05680 Oryza barthii OBART02G05680 I 0.000
OBART02G11580 Oryza barthii OBART02G11580 I 0.000
OGLUM02G05620 Oryza glumaepatula OGLUM02G05620 I 0.000
OGLUM02G11500 Oryza glumaepatula OGLUM02G11500 I 0.000
OMERI02G06470 Oryza meridionalis OMERI02G06470 I 0.000
OMERI02G12230 Oryza meridionalis OMERI02G12230 I 0.000
ONIVA02G06040 Oryza nivara ONIVA02G06040 I 0.000
ONIVA02G12920 Oryza nivara ONIVA02G12920 I 0.000
OPUNC02G10230 Oryza punctata OPUNC02G10230 I 0.000
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I 0.000
orange1.1g042014m.g Citrus sinensis orange1.1g042014m.g I 0.000
orange1.1g043159m.g Citrus sinensis orange1.1g043159m.g I 0.000
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I 0.000
ORGLA02G0052000 Oryza glaberrima ORGLA02G0052000 I 0.000
ORGLA02G0104200 Oryza glaberrima ORGLA02G0104200 I 0.000
ORUFI02G05790 Oryza rufipogon ORUFI02G05790 I 0.000
ORUFI02G11610 Oryza rufipogon ORUFI02G11610 I 0.000
OS02G0175100 Oryza sativa OS02G0175100 I 0.000
OS02G0266800 Oryza sativa OS02G0266800 D 0.000
Pavir.Aa03364 Panicum virgatum Pavir.Aa03364 I 0.000
Pavir.Ab00505 Panicum virgatum Pavir.Ab00505 I 0.000
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I 0.000
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I 0.000
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I 0.000
PK01815.1 Cannabis sativa PK01815.1 N 0.000
Pm002353 Prunus mume Pm002353 I 0.000
Pm015434 Prunus mume Pm015434 I 0.000
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I 0.000
POPTR_0008s11260 Populus trichocarpa POPTR_0008s11260 I 0.000
POPTR_0010s14530 Populus trichocarpa POPTR_0010s14530 I 0.000
POPTR_0014s00790 Populus trichocarpa POPTR_0014s00790 N 0.000
POPTR_0017s14490 Populus trichocarpa POPTR_0017s14490 I 0.000
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I 0.000
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I 0.000
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I 0.000
SapurV1A.0060s0610 Salix purpurea SapurV1A.0060s0610 I 0.000
SapurV1A.0084s0340 Salix purpurea SapurV1A.0084s0340 I 0.000
SapurV1A.0235s0220 Salix purpurea SapurV1A.0235s0220 N 0.000
SapurV1A.0432s0050 Salix purpurea SapurV1A.0432s0050 I 0.000
Sb04g005020 Sorghum bicolor Sb04g005020 I 0.000
Si017778m.g Setaria italica Si017778m.g I 0.000
Solyc01g109880.2 Solanum lycopersicum Solyc01g109880.2 I 0.000
Solyc03g046440.1 Solanum lycopersicum Solyc03g046440.1 I 0.000
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I 0.000
TCM_000835 Theobroma cacao TCM_000835 I 0.000
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I 0.000
VIT_01s0010g00930 Vitis vinifera VIT_01s0010g00930 I 0.000
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I 0.000
VIT_18s0001g13040 Vitis vinifera VIT_18s0001g13040 N 0.000