CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GA18168
(
Drosophila pseudoobscura
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0078175
T114728_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0284814
C2H2 ZF
292
314
YICDVCGNIYPTQARLTEHMKFH
FBpp0284814
C2H2 ZF
320
342
HECEICGRGFVQNQQLVRHMNTH
FBpp0284814
C2H2 ZF
348
370
YKCNYCPAAFADRSTKTKHHRIH
FBpp0284814
C2H2 ZF
376
398
YECDVCARTFTYSDNLKFHKMIH
FBpp0284814
C2H2 ZF
404
426
HVCDLCGKGFVKAYKMRLHRVTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila pseudoobscura
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR01G16460
Leersia perrieri
LPERR01G16460
N
OB01G28790
Oryza brachyantha
OB01G28790
N
OBART01G18970
Oryza barthii
OBART01G18970
N
OGLUM01G22570
Oryza glumaepatula
OGLUM01G22570
N
OLONG_002006
Oryza longistaminata
OLONG_002006
N
ONIVA01G21500
Oryza nivara
ONIVA01G21500
N
OPUNC01G19360
Oryza punctata
OPUNC01G19360
N
ORUFI01G21360
Oryza rufipogon
ORUFI01G21360
N
OS01G0547200
Oryza sativa
OS01G0547200
N
Pavir.Eb01543
Panicum virgatum
Pavir.Eb01543
N
Sb03g025310
Sorghum bicolor
Sb03g025310
N
Si000106m.g
Setaria italica
Si000106m.g
N