OBART01G18970 (Oryza barthii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 OBART01G18970 T027060_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART01G18970.1 BED ZF 90 135
OBART01G18970.1 BED ZF 228 268
OBART01G18970.1 BED ZF 420 466
OBART01G18970.1 BED ZF 525 570
OBART01G18970.2 BED ZF 90 135
OBART01G18970.2 BED ZF 228 268
OBART01G18970.2 BED ZF 420 466
OBART01G18970.2 BED ZF 525 570

Links

Other BED ZF family TFs
Other Oryza barthii TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001450 Oryza indica BGIOSGA001450 N 0.994
ONIVA01G21500 Oryza nivara ONIVA01G21500 N 0.994
ORUFI01G21360 Oryza rufipogon ORUFI01G21360 N 0.994
OS01G0547200 Oryza sativa OS01G0547200 N 0.994
OLONG_002006 Oryza longistaminata OLONG_002006 N 0.988
OGLUM01G22570 Oryza glumaepatula OGLUM01G22570 N 0.982
OPUNC01G19360 Oryza punctata OPUNC01G19360 N 0.958
LPERR01G16460 Leersia perrieri LPERR01G16460 N 0.915
OB01G28790 Oryza brachyantha OB01G28790 N 0.885
Si000106m.g Setaria italica Si000106m.g N 0.835
Pavir.Eb01543 Panicum virgatum Pavir.Eb01543 N 0.809
Sb03g025310 Sorghum bicolor Sb03g025310 N 0.799