CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH21701
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0129162
T115434_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG3065
M06134_2.00
Drosophila melanogaster
RCCACGCCCMY
RKGGGCGTGGY
B1H
Zhu et al.(2011)
CG3065_F1-3_SANGER_2.5_FBgn0034946
0.811
0.957
CG3065
M06135_2.00
Drosophila melanogaster
NNRCCACGCCCMCNN
NNGKGGGCGTGGYNN
B1H
Zhu et al.(2011)
CG3065_F1-3_SOLEXA_2.5_FBgn0034946
0.811
0.957
CG3065
M06136_2.00
Drosophila melanogaster
NNRCCACGCCCMYH
DRKGGGCGTGGYNN
B1H
Zhu et al.(2011)
CG3065_F1-5_SOLEXA_2.5_FBgn0034946
0.811
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0155607
C2H2 ZF
131
155
FVCPYDNCTKSYGKSSHLRSHLTWH
FBpp0155607
C2H2 ZF
161
185
FVCSEPKCGKGFTRSDELNRHLRTH
FBpp0155607
C2H2 ZF
191
213
FECMQCSKKFSRSDHLTKHLATH
FBpp0155607
C2H2 ZF
376
398
FRCRHCEKRFKRQDDLNRHIRTH
FBpp0155607
C2H2 ZF
404
426
YACNQCCRRFVRSDHLKKHQQTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASIM_0001235301
Anisakis simplex
ASIM_0001235301
N
ASU_02375
Ascaris suum
ASU_02375
N
Bm3336
Brugia malayi
Bm3336
N
LOAG_09705
Loa loa
LOAG_09705
N
nDi.2.2.2.g08867
Dirofilaria immitis
nDi.2.2.2.g08867
N
nOo.2.0.1.g08138
Onchocerca ochengi
nOo.2.0.1.g08138
N
PTRK_0001125100
Parastrongyloides trichosuri
PTRK_0001125100
N
SMUV_0001013301
Syphacia muris
SMUV_0001013301
N
TCNE_0001971201
Toxocara canis
TCNE_0001971201
N
WBGene00238640
Onchocerca volvulus
WBGene00238640
N
WUBG_04275
Wuchereria bancrofti
WUBG_04275
N