CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0001125100
(
Parastrongyloides trichosuri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PTRK_0001125100
T155754_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0001125100.1
C2H2 ZF
225
247
FVCSICGFSCNSKFHHNSHMNTH
PTRK_0001125100.1
C2H2 ZF
250
274
HQCQNACGYNTRTLGRLKKHMLSCH
PTRK_0001125100.1
C2H2 ZF
413
435
YKCKQCNNVSTSKEEQWAHARTH
PTRK_0001125100.1
C2H2 ZF
442
464
LVCPKCDFVTEYKHHLEYHIRNH
PTRK_0001125100.1
C2H2 ZF
470
492
FQCNKCSYSCVNKSMLNSHMKSH
PTRK_0001125100.1
C2H2 ZF
498
522
FRCRDCTYATKYCHSLKLHLRKYNH
Links
Other
C2H2 ZF
family TFs
Other
Parastrongyloides trichosuri
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0001267000
Strongyloides papillosus
SPAL_0001267000
N
0.788
SSTP_0000886300
Strongyloides stercoralis
SSTP_0000886300
N
0.788
SVE_0945800
Strongyloides venezuelensis
SVE_0945800
N
0.788
WUBG_04275
Wuchereria bancrofti
WUBG_04275
N
0.779
Bm3336
Brugia malayi
Bm3336
N
0.779
nDi.2.2.2.g08867
Dirofilaria immitis
nDi.2.2.2.g08867
N
0.779
ASU_02375
Ascaris suum
ASU_02375
N
0.776
EVEC_0000670401
Enterobius vermicularis
EVEC_0000670401
N
0.758
SMUV_0001013301
Syphacia muris
SMUV_0001013301
N
0.758
LOAG_09705
Loa loa
LOAG_09705
N
0.756
WBGene00238640
Onchocerca volvulus
WBGene00238640
N
0.756
nOo.2.0.1.g08138
Onchocerca ochengi
nOo.2.0.1.g08138
N
0.756