CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0001013301
(
Syphacia muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMUV_0001013301
T156457_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0001013301-mRNA-1
C2H2 ZF
118
140
LVCQICGFSCNSKFHYNSHMNTH
SMUV_0001013301-mRNA-1
C2H2 ZF
143
166
HQCTMCDYTSRTEGRLKKHMRDSH
SMUV_0001013301-mRNA-1
C2H2 ZF
262
284
YKCKQCNQVSTSKEEQWIHARSH
SMUV_0001013301-mRNA-1
C2H2 ZF
291
313
LECNRCGFVTEYKHHLEYHLRNH
SMUV_0001013301-mRNA-1
C2H2 ZF
319
341
FQCRKCAYSCVNKSMLNSHMKSH
SMUV_0001013301-mRNA-1
C2H2 ZF
347
371
FRCRDCSYATKYCHSLKLHLKKYNH
Links
Other
C2H2 ZF
family TFs
Other
Syphacia muris
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EVEC_0000670401
Enterobius vermicularis
EVEC_0000670401
N
0.802
TCNE_0001971201
Toxocara canis
TCNE_0001971201
N
0.779
ASU_02375
Ascaris suum
ASU_02375
N
0.779
nOo.2.0.1.g08138
Onchocerca ochengi
nOo.2.0.1.g08138
N
0.776
Bm3336
Brugia malayi
Bm3336
N
0.776
WBGene00238640
Onchocerca volvulus
WBGene00238640
N
0.776
nDi.2.2.2.g08867
Dirofilaria immitis
nDi.2.2.2.g08867
N
0.776
LOAG_09705
Loa loa
LOAG_09705
N
0.776
WUBG_04275
Wuchereria bancrofti
WUBG_04275
N
0.776
PTRK_0001125100
Parastrongyloides trichosuri
PTRK_0001125100
N
0.758