GLOINDRAFT_221110 (Rhizophagus irregularis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLOINDRAFT_221110 T118152_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00 		Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221 		0.763 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ESA06637 C2H2 ZF 184 206
ESA06637 C2H2 ZF 212 236

Links

Other C2H2 ZF family TFs
Other Rhizophagus irregularis TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgeneshMC_pg.C_10568 Mucor circinelloides estExt_fgeneshMC_pg.C_10568 I 0.803
estExt_Genewise1.C_80340 Mucor circinelloides estExt_Genewise1.C_80340 I 0.774
GLOINDRAFT_24118 Rhizophagus irregularis GLOINDRAFT_24118 I 0.827
GLOINDRAFT_58638 Rhizophagus irregularis GLOINDRAFT_58638 I 0.827
gw1.1.1257.1 Mucor circinelloides gw1.1.1257.1 I 0.792
gw1.15.181.1 Phycomyces blakesleeanus gw1.15.181.1 I 0.774
gw1.23.155.1 Phycomyces blakesleeanus gw1.23.155.1 I 0.763
gw1.25.121.1 Phycomyces blakesleeanus gw1.25.121.1 I 0.786
gw1.3.911.1 Heterobasidion annosum gw1.3.911.1 N 0.759
gw1.6.924.1 Mucor circinelloides gw1.6.924.1 N 0.761
gw1.73.24.1 Phycomyces blakesleeanus gw1.73.24.1 I 0.786
HETIRDRAFT_18758 Heterobasidion irregulare HETIRDRAFT_18758 N 0.759
PHACADRAFT_73403 Phanerochaete carnosa PHACADRAFT_73403 N 0.767
RO3G_01826 Rhizopus oryzae RO3G_01826 I 0.792
RO3G_05801 Rhizopus oryzae RO3G_05801 D 0.763
RO3G_13834 Rhizopus oryzae RO3G_13834 I 0.769