GLYMA03G33060 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA03G33060 T118333_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.795 0.826
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.795 0.826
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.790 0.761
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.786 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.786 0.761
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.774 0.696
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.772 0.804
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.761 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA03G33060.1 C2H2 ZF 40 62
GLYMA03G33060.1 C2H2 ZF 78 100

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

351 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29889.m003248 Ricinus communis 29889.m003248 I
Aquca_003_00608 Aquilegia coerulea Aquca_003_00608 N
GATA15 Arabidopsis thaliana AT3G06740 D
GATA17 Arabidopsis thaliana AT3G16870 I
GATA16 Arabidopsis thaliana AT5G49300 D
BGIOSGA013867 Oryza indica BGIOSGA013867 I
BGIOSGA013869 Oryza indica BGIOSGA013869 I
Bo00847s050 Brassica oleracea Bo00847s050 I
Bo1g055120 Brassica oleracea Bo1g055120 I
Bo1g122970 Brassica oleracea Bo1g122970 I
Bo3g068560 Brassica oleracea Bo3g068560 I
Bo5g123610 Brassica oleracea Bo5g123610 I
Bo7g092660 Brassica oleracea Bo7g092660 I
Bo7g104200 Brassica oleracea Bo7g104200 I
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I
Bostr.22252s0362 Boechera stricta Bostr.22252s0362 I
Bostr.28625s0006 Boechera stricta Bostr.28625s0006 I
Bostr.30275s0055 Boechera stricta Bostr.30275s0055 I
Bra012742 Brassica rapa Bra012742 I
Bra020650 Brassica rapa Bra020650 I
Bra021209 Brassica rapa Bra021209 I
Bra022184 Brassica rapa Bra022184 I
Bra033533 Brassica rapa Bra033533 I
Bra037421 Brassica rapa Bra037421 I
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I
Cagra.0053s0014 Capsella grandiflora Cagra.0053s0014 I
Cagra.0133s0025 Capsella grandiflora Cagra.0133s0025 I
Cagra.5497s0020 Capsella grandiflora Cagra.5497s0020 I
Carubv10005860m.g Capsella rubella Carubv10005860m.g I
Carubv10014665m.g Capsella rubella Carubv10014665m.g I
Carubv10014841m.g Capsella rubella Carubv10014841m.g I
Carubv10027332m.g Capsella rubella Carubv10027332m.g I
cassava15577.m1 Manihot esculenta cassava15577.m1 I
cassava15588.m1 Manihot esculenta cassava15588.m1 I
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I
Ca_02992 Cicer arietinum Ca_02992 I
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I
Cla009422 Citrullus lanatus Cla009422 I
Cla022104 Citrullus lanatus Cla022104 I
Cucsa.069460 Cucumis sativus Cucsa.069460 I
Cucsa.252730 Cucumis sativus Cucsa.252730 I
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I
fgenesh1_pm.C_scaffold_7002128 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7002128 I
GATA17 Arabidopsis lyrata fgenesh2_kg.3__1856__AT3G16870.1 I
GATA15 Arabidopsis lyrata fgenesh2_kg.3__690__AT3G06740.1 I
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I
GLYMA07G37190 Glycine max GLYMA07G37190 I
GLYMA17G03410 Glycine max GLYMA17G03410 I
Gorai.002G029400 Gossypium raimondii Gorai.002G029400 I
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I
Gorai.013G206400 Gossypium raimondii Gorai.013G206400 N
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I
LPERR03G33900 Leersia perrieri LPERR03G33900 I
Lus10016849.g Linum usitatissimum Lus10016849.g I
Lus10031464.g Linum usitatissimum Lus10031464.g I
Lus10037721.g Linum usitatissimum Lus10037721.g I
MDP0000309902 Malus domestica MDP0000309902 I
mgf003937m Mimulus guttatus mgf003937m I
mgf022078m Mimulus guttatus mgf022078m I
MTR_4g121110 Medicago truncatula MTR_4g121110 I
OBART03G39750 Oryza barthii OBART03G39750 I
OGLUM03G39650 Oryza glumaepatula OGLUM03G39650 I
OLONG_023900 Oryza longistaminata OLONG_023900 I
OMERI03G36600 Oryza meridionalis OMERI03G36600 I
ONIVA03G41600 Oryza nivara ONIVA03G41600 I
OPUNC03G36900 Oryza punctata OPUNC03G36900 I
OPUNC03G36910 Oryza punctata OPUNC03G36910 I
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I
ORUFI03G41540 Oryza rufipogon ORUFI03G41540 I
OS03G0831200 Oryza sativa OS03G0831200 I
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I
PGSC0003DMG400023434 Solanum tuberosum PGSC0003DMG400023434 I
PGSC0003DMG400024783 Solanum tuberosum PGSC0003DMG400024783 I
PK18820.1 Cannabis sativa PK18820.1 I
PK21934.1 Cannabis sativa PK21934.1 I
Pm003128 Prunus mume Pm003128 I
Pm008287 Prunus mume Pm008287 I
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I
GATA16 Arabidopsis lyrata scaffold_801309.1 I
Solyc01g100220.2 Solanum lycopersicum Solyc01g100220.2 I
Solyc05g054400.2 Solanum lycopersicum Solyc05g054400.2 I
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I
TCM_004753 Theobroma cacao TCM_004753 I
TCM_021303 Theobroma cacao TCM_021303 I
TCM_026732 Theobroma cacao TCM_026732 I
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I
Thhalv10021612m.g Eutrema salsugineum Thhalv10021612m.g I
Thhalv10021708m.g Eutrema salsugineum Thhalv10021708m.g I
Thhalv10026300m.g Eutrema salsugineum Thhalv10026300m.g I
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I