CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA12G0040600
(
Oryza glaberrima
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ORGLA12G0040600
T125126_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA12G0040600.1
C2H2 ZF
319
341
HVCGRCGAKRFSVMADLKTHEKH
ORGLA12G0040600.1
C2H2 ZF
342
367
CGRDRWLCSCGTSFSRKDKLFAHVAL
Links
Other
C2H2 ZF
family TFs
Other
Oryza glaberrima
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037065
Oryza indica
BGIOSGA037065
N
0.827
LPERR12G04020
Leersia perrieri
LPERR12G04020
N
0.827
OB12G14220
Oryza brachyantha
OB12G14220
N
0.779
OGLUM12G05080
Oryza glumaepatula
OGLUM12G05080
N
0.827
ONIVA12G03970
Oryza nivara
ONIVA12G03970
N
0.827
OPUNC12G04340
Oryza punctata
OPUNC12G04340
N
0.827
ORUFI12G04900
Oryza rufipogon
ORUFI12G04900
N
0.827
STAR3
Oryza sativa
OS12G0170400
N
0.827
Pavir.Cb01989
Panicum virgatum
Pavir.Cb01989
N
0.798
Pavir.J02020
Panicum virgatum
Pavir.J02020
N
0.798
Si010000m.g
Setaria italica
Si010000m.g
N
0.798