Pavir.J02020 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J02020 T143399_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J02020.1.p C2H2 ZF 322 344
Pavir.J02020.1.p C2H2 ZF 345 370

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si010000m.g Setaria italica Si010000m.g N 0.827
Pavir.Cb01989 Panicum virgatum Pavir.Cb01989 N 0.827
BGIOSGA037065 Oryza indica BGIOSGA037065 N 0.798
LPERR12G04020 Leersia perrieri LPERR12G04020 N 0.798
OGLUM12G05080 Oryza glumaepatula OGLUM12G05080 N 0.798
ONIVA12G03970 Oryza nivara ONIVA12G03970 N 0.798
OPUNC12G04340 Oryza punctata OPUNC12G04340 N 0.798
ORGLA12G0040600 Oryza glaberrima ORGLA12G0040600 N 0.798
ORUFI12G04900 Oryza rufipogon ORUFI12G04900 N 0.798
STAR3 Oryza sativa OS12G0170400 N 0.798
OB12G14220 Oryza brachyantha OB12G14220 N 0.774