CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OB12G14220
(
Oryza brachyantha
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OB12G14220
T124609_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB12G14220.1
C2H2 ZF
325
347
HICGRCGAKKFSVMADLKTHEKH
OB12G14220.1
C2H2 ZF
346
373
KHCGRDRWLCSCGTSFSRKDKLFAHVAL
Links
Other
C2H2 ZF
family TFs
Other
Oryza brachyantha
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA037065
Oryza indica
BGIOSGA037065
N
0.779
LPERR12G04020
Leersia perrieri
LPERR12G04020
N
0.779
OGLUM12G05080
Oryza glumaepatula
OGLUM12G05080
N
0.779
ONIVA12G03970
Oryza nivara
ONIVA12G03970
N
0.779
OPUNC12G04340
Oryza punctata
OPUNC12G04340
N
0.779
ORGLA12G0040600
Oryza glaberrima
ORGLA12G0040600
N
0.779
ORUFI12G04900
Oryza rufipogon
ORUFI12G04900
N
0.779
STAR3
Oryza sativa
OS12G0170400
N
0.779
Si010000m.g
Setaria italica
Si010000m.g
N
0.774
Pavir.Cb01989
Panicum virgatum
Pavir.Cb01989
N
0.774
Pavir.J02020
Panicum virgatum
Pavir.J02020
N
0.774