CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb07g023890
(
Sorghum bicolor
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Sb07g023890
T128249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g023890.1
C2H2 ZF
345
371
YVCNRCNRKHFSVLSDLRTHEKHCGDH
Sb07g023890.1
C2H2 ZF
367
397
HCGDHRWLCSCGTSFSRKDKLVGHLALFTGH
Links
Other
C2H2 ZF
family TFs
Other
Sorghum bicolor
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF118
Arabidopsis thaliana
AT1G68550
D
ERF119
Arabidopsis thaliana
AT3G25890
D
Bo2g138790
Brassica oleracea
Bo2g138790
I
Bo7g082250
Brassica oleracea
Bo7g082250
I
Bostr.0556s0264
Boechera stricta
Bostr.0556s0264
I
Bostr.26959s0035
Boechera stricta
Bostr.26959s0035
I
Bra036360
Brassica rapa
Bra036360
I
Cagra.6197s0021
Capsella grandiflora
Cagra.6197s0021
I
Carubv10017565m.g
Capsella rubella
Carubv10017565m.g
I
evm.TU.supercontig_1.178
Carica papaya
evm.TU.supercontig_1.178
I
fgenesh2_kg.2__1107__AT1G68550.2
Arabidopsis lyrata
fgenesh2_kg.2__1107__AT1G68550.2
I
Gorai.008G183300
Gossypium raimondii
Gorai.008G183300
I
scaffold_500470.1
Arabidopsis lyrata
scaffold_500470.1
I
TCM_011811
Theobroma cacao
TCM_011811
I
Thhalv10004526m.g
Eutrema salsugineum
Thhalv10004526m.g
I
Thhalv10019722m.g
Eutrema salsugineum
Thhalv10019722m.g
I