Bostr.0556s0264 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.0556s0264 T007540_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF119
M01093_2.00 		Arabidopsis thaliana
NNNGCCGNN
NNCGGCNNN		 PBM
Lambert et al.(2019)
pTH11551 		0.779 0.920
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.702 0.780
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.702 0.780
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.702 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0264.1.p AP2 128 178

Links

Other AP2 family TFs
Other Boechera stricta TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_500470.1 Arabidopsis lyrata scaffold_500470.1 I 0.792
Cagra.6197s0021 Capsella grandiflora Cagra.6197s0021 I 0.791
Carubv10017565m.g Capsella rubella Carubv10017565m.g I 0.791
Thhalv10004526m.g Eutrema salsugineum Thhalv10004526m.g I 0.790
Bo7g082250 Brassica oleracea Bo7g082250 I 0.788
Bra025170 Brassica rapa Bra025170 I 0.788
ERF119 Arabidopsis thaliana AT3G25890 D 0.779
Bra036360 Brassica rapa Bra036360 I 0.761
Bo2g138790 Brassica oleracea Bo2g138790 I 0.744
Bostr.26959s0035 Boechera stricta Bostr.26959s0035 I 0.732
Thhalv10019722m.g Eutrema salsugineum Thhalv10019722m.g I 0.716
fgenesh2_kg.2__1107__AT1G68550.2 Arabidopsis lyrata fgenesh2_kg.2__1107__AT1G68550.2 I 0.714
evm.TU.supercontig_1.178 Carica papaya evm.TU.supercontig_1.178 I 0.707
ERF118 Arabidopsis thaliana AT1G68550 D 0.702
TCM_011811 Theobroma cacao TCM_011811 I 0.700
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.700
Bo6g106990 Brassica oleracea Bo6g106990 N 0.681
Bra004318 Brassica rapa Bra004318 N 0.681