Cflo_02188--XP_001120905.1_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_02188--XP_001120905.1_APIME T133761_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.806 0.955
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.806 0.955
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.806 0.955
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.806 0.955
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.806 0.955
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.806 0.955
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.806 0.955
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.785 0.883
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.785 0.883
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.785 0.883
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.785 0.883
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 3 25
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 31 53
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 59 81
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 87 109
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 115 133

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000464 Ricinus communis 29598.m000464 N 0.000
29737.m001209 Ricinus communis 29737.m001209 I 0.000
29883.m001988 Ricinus communis 29883.m001988 N 0.000
AMTR_s00065p00184910 Amborella trichopoda AMTR_s00065p00184910 I 0.000
Aquca_016_00200 Aquilegia coerulea Aquca_016_00200 I 0.000
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.000
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.000
BHLH66 Arabidopsis thaliana AT2G24260 I 0.000
UNE12 Arabidopsis thaliana AT4G02590 N 0.000
LRL2 Arabidopsis thaliana AT4G30980 D 0.000
BHLH82 Arabidopsis thaliana AT5G58010 I 0.000
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.000
BGIOSGA021777 Oryza indica BGIOSGA021777 I 0.000
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.000
BGIOSGA029759 Oryza indica BGIOSGA029759 I 0.000
Bo01031s030 Brassica oleracea Bo01031s030 N 0.000
Bo1g011740 Brassica oleracea Bo1g011740 I 0.000
Bo2g028920 Brassica oleracea Bo2g028920 I 0.000
Bo2g100750 Brassica oleracea Bo2g100750 N 0.000
Bo3g018990 Brassica oleracea Bo3g018990 I 0.000
Bo4g154370 Brassica oleracea Bo4g154370 I 0.000
Bo5g003580 Brassica oleracea Bo5g003580 N 0.000
Bo8g099910 Brassica oleracea Bo8g099910 I 0.000
Bo9g005930 Brassica oleracea Bo9g005930 N 0.000
Bo9g133640 Brassica oleracea Bo9g133640 I 0.000
Bostr.26833s0448 Boechera stricta Bostr.26833s0448 I 0.000
Bostr.27895s0056 Boechera stricta Bostr.27895s0056 I 0.000
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.000
Bostr.7867s0954 Boechera stricta Bostr.7867s0954 I 0.000
Bra000872 Brassica rapa Bra000872 N 0.000
Bra002679 Brassica rapa Bra002679 I 0.000
Bra006788 Brassica rapa Bra006788 I 0.000
Bra007863 Brassica rapa Bra007863 I 0.000
Bra011237 Brassica rapa Bra011237 I 0.000
Bra018539 Brassica rapa Bra018539 N 0.000
Bra020398 Brassica rapa Bra020398 I 0.000
Bra032111 Brassica rapa Bra032111 I 0.000
Bra033368 Brassica rapa Bra033368 N 0.000
Bra036256 Brassica rapa Bra036256 N 0.000
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I 0.000
BRADI1G47350 Brachypodium distachyon BRADI1G47350 I 0.000
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.000
Cagra.0380s0028 Capsella grandiflora Cagra.0380s0028 I 0.000
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.000
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.000
Cagra.2848s0086 Capsella grandiflora Cagra.2848s0086 I 0.000
Cagra.4091s0032 Capsella grandiflora Cagra.4091s0032 I 0.000
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.000
Carubv10005248m.g Capsella rubella Carubv10005248m.g I 0.000
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.000
Carubv10023532m.g Capsella rubella Carubv10023532m.g I 0.000
Carubv10028492m.g Capsella rubella Carubv10028492m.g I 0.000
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.000
cassava22164.valid.m1 Manihot esculenta cassava22164.valid.m1 I 0.000
cassava22165.valid.m1 Manihot esculenta cassava22165.valid.m1 I 0.000
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N 0.000
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.000
Ca_03340 Cicer arietinum Ca_03340 I 0.000
Ca_03755 Cicer arietinum Ca_03755 N 0.000
Ca_07790 Cicer arietinum Ca_07790 N 0.000
Ca_12194 Cicer arietinum Ca_12194 N 0.000
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.000
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.000
chr6.CM0037.770.nc Lotus japonicus chr6.CM0037.770.nc I 0.000
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.000
Ciclev10008192m.g Citrus clementina Ciclev10008192m.g I 0.000
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.000
Cla011475 Citrullus lanatus Cla011475 N 0.000
Cla013823 Citrullus lanatus Cla013823 I 0.000
Cla015040 Citrullus lanatus Cla015040 N 0.000
Cla019007 Citrullus lanatus Cla019007 I 0.000
Cucsa.132830 Cucumis sativus Cucsa.132830 I 0.000
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.000
Cucsa.350940 Cucumis sativus Cucsa.350940 I 0.000
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.000
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.000
Eucgr.C00360 Eucalyptus grandis Eucgr.C00360 I 0.000
Eucgr.C02592 Eucalyptus grandis Eucgr.C02592 I 0.000
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.000
evm.TU.contig_30708.1 Carica papaya evm.TU.contig_30708.1 I 0.000
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.000
e_gw1.173.38.1 Physcomitrella patens e_gw1.173.38.1 I 0.000
e_gw1.209.40.1 Physcomitrella patens e_gw1.209.40.1 D 0.000
F775_30957 Aegilops tauschii F775_30957 I 0.000
LRL3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001435 I 0.000
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.000
LRL1 Arabidopsis lyrata fgenesh2_kg.4__341__AT2G24260.1 I 0.000
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.000
LRL2 Arabidopsis lyrata fgenesh2_kg.7__1084__AT4G30980.1 I 0.000
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.000
gene10062-v1.0-hybrid Fragaria vesca gene10062-v1.0-hybrid I 0.000
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.000
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.000
GLYMA02G36380 Glycine max GLYMA02G36380 I 0.000
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.000
GLYMA09G14380 Glycine max GLYMA09G14380 I 0.000
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.000
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.000
GLYMA15G33020 Glycine max GLYMA15G33020 I 0.000
GLYMA17G08300 Glycine max GLYMA17G08300 I 0.000
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.000
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.000
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.000
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.000
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.000
Gorai.009G055200 Gossypium raimondii Gorai.009G055200 I 0.000
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.000
GRMZM2G027563 Zea mays GRMZM2G027563 I 0.000
GRMZM2G067654 Zea mays GRMZM2G067654 I 0.000
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.000
GRMZM2G350165 Zea mays GRMZM2G350165 I 0.000
GSMUA_Achr10G24090_001 Musa acuminata GSMUA_Achr10G24090_001 I 0.000
GSMUA_Achr10G30710_001 Musa acuminata GSMUA_Achr10G30710_001 I 0.000
GSMUA_Achr4G01910_001 Musa acuminata GSMUA_Achr4G01910_001 I 0.000
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.000
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.000
GSMUA_Achr5G16470_001 Musa acuminata GSMUA_Achr5G16470_001 I 0.000
LPERR02G29460 Leersia perrieri LPERR02G29460 I 0.000
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.000
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.000
LPERR09G07210 Leersia perrieri LPERR09G07210 I 0.000
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.000
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.000
Lus10021846.g Linum usitatissimum Lus10021846.g I 0.000
MDP0000121522 Malus domestica MDP0000121522 I 0.000
MDP0000176749 Malus domestica MDP0000176749 N 0.000
MDP0000295593 Malus domestica MDP0000295593 N 0.000
MDP0000534784 Malus domestica MDP0000534784 I 0.000
mgf001459m Mimulus guttatus mgf001459m I 0.000
mgf009435m Mimulus guttatus mgf009435m I 0.000
mgf014585m Mimulus guttatus mgf014585m I 0.000
MLOC_13438 Hordeum vulgare MLOC_13438 I 0.000
MLOC_38567 Hordeum vulgare MLOC_38567 I 0.000
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.000
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.000
MTR_4g131160 Medicago truncatula MTR_4g131160 I 0.000
OB06G14990 Oryza brachyantha OB06G14990 I 0.000
OB07G13990 Oryza brachyantha OB07G13990 I 0.000
OBART03G37400 Oryza barthii OBART03G37400 I 0.000
OBART06G05420 Oryza barthii OBART06G05420 I 0.000
OBART07G05280 Oryza barthii OBART07G05280 I 0.000
OGLUM02G37030 Oryza glumaepatula OGLUM02G37030 I 0.000
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.000
OGLUM06G05610 Oryza glumaepatula OGLUM06G05610 I 0.000
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.000
OGLUM09G10750 Oryza glumaepatula OGLUM09G10750 I 0.000
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.000
OMERI02G33790 Oryza meridionalis OMERI02G33790 I 0.000
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.000
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.000
ONIVA02G37880 Oryza nivara ONIVA02G37880 I 0.000
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.000
ONIVA06G06250 Oryza nivara ONIVA06G06250 I 0.000
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.000
ONIVA09G10010 Oryza nivara ONIVA09G10010 I 0.000
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.000
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.000
orange1.1g012156m.g Citrus sinensis orange1.1g012156m.g I 0.000
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.000
ORGLA02G0311000 Oryza glaberrima ORGLA02G0311000 I 0.000
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.000
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.000
ORUFI02G37320 Oryza rufipogon ORUFI02G37320 I 0.000
ORUFI06G05560 Oryza rufipogon ORUFI06G05560 I 0.000
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.000
OS03G0797600 Oryza sativa OS03G0797600 I 0.000
OS06G0184000 Oryza sativa OS06G0184000 I 0.000
Pavir.Aa00205 Panicum virgatum Pavir.Aa00205 I 0.000
Pavir.Ab03158 Panicum virgatum Pavir.Ab03158 I 0.000
Pavir.Ba01914 Panicum virgatum Pavir.Ba01914 I 0.000
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.000
Pavir.Bb02117 Panicum virgatum Pavir.Bb02117 I 0.000
Pavir.Da02078 Panicum virgatum Pavir.Da02078 I 0.000
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.000
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.000
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.000
Pavir.J04712 Panicum virgatum Pavir.J04712 I 0.000
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.000
PGSC0003DMG400007827 Solanum tuberosum PGSC0003DMG400007827 I 0.000
PGSC0003DMG400011133 Solanum tuberosum PGSC0003DMG400011133 I 0.000
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.000
PK14040.1 Cannabis sativa PK14040.1 I 0.000
PK20184.1 Cannabis sativa PK20184.1 N 0.000
PK25419.1 Cannabis sativa PK25419.1 N 0.000
Pm003525 Prunus mume Pm003525 N 0.000
Pm020229 Prunus mume Pm020229 N 0.000
Pm027715 Prunus mume Pm027715 I 0.000
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.000
POPTR_0018s11800 Populus trichocarpa POPTR_0018s11800 I 0.000
PRUPE_ppa005254mg Prunus persica PRUPE_ppa005254mg I 0.000
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.000
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.000
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.000
SapurV1A.0100s0120 Salix purpurea SapurV1A.0100s0120 I 0.000
SapurV1A.0347s0080 Salix purpurea SapurV1A.0347s0080 I 0.000
Sb01g005130 Sorghum bicolor Sb01g005130 I 0.000
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.000
Sb02g024750 Sorghum bicolor Sb02g024750 I 0.000
Sb04g035890 Sorghum bicolor Sb04g035890 I 0.000
Sb10g005650 Sorghum bicolor Sb10g005650 I 0.000
SELMODRAFT_24890 Selaginella moellendorffii SELMODRAFT_24890 I 0.000
SELMODRAFT_24892 Selaginella moellendorffii SELMODRAFT_24892 I 0.000
SELMODRAFT_422025 Selaginella moellendorffii SELMODRAFT_422025 I 0.000
SELMODRAFT_444782 Selaginella moellendorffii SELMODRAFT_444782 I 0.000
Si017553m.g Setaria italica Si017553m.g I 0.000
Si029708m.g Setaria italica Si029708m.g I 0.000
Si030704m.g Setaria italica Si030704m.g I 0.000
Si036929m.g Setaria italica Si036929m.g I 0.000
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.000
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I 0.000
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.000
Solyc12g010170.1 Solanum lycopersicum Solyc12g010170.1 I 0.000
TCM_004217 Theobroma cacao TCM_004217 N 0.000
TCM_026346 Theobroma cacao TCM_026346 N 0.000
TCM_037077 Theobroma cacao TCM_037077 I 0.000
Thhalv10000220m.g Eutrema salsugineum Thhalv10000220m.g I 0.000
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.000
Thhalv10014212m.g Eutrema salsugineum Thhalv10014212m.g I 0.000
Thhalv10025656m.g Eutrema salsugineum Thhalv10025656m.g I 0.000
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.000
Traes_5BL_DB5410008 Triticum aestivum Traes_5BL_DB5410008 I 0.000
Traes_5DL_1CD573458 Triticum aestivum Traes_5DL_1CD573458 I 0.000
Traes_6AL_FD6EC5EA9 Triticum aestivum Traes_6AL_FD6EC5EA9 I 0.000
TRIUR3_33768 Triticum urartu TRIUR3_33768 I 0.000
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.000
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.000
VIT_11s0037g00040 Vitis vinifera VIT_11s0037g00040 I 0.000
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.000