estExt_fgenesh2_pg.C_1910015 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_1910015 T138647_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 120 144
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 160 184
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 190 211
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 220 242
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 246 269
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 275 297
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 303 326
estExt_fgenesh2_pg.C_1910015 C2H2 ZF 335 358

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0001268601 Angiostrongylus cantonensis ACAC_0001268601 I
ACOC_0000685901 Angiostrongylus costaricensis ACOC_0000685901 I
ANCCEY_06081 Ancylostoma ceylanicum ANCCEY_06081 I
ASU_05270 Ascaris suum ASU_05270 I
CBG16689 Caenorhabditis briggsae CBG16689 I
CBN21670 Caenorhabditis brenneri CBN21670 I
CJA18173 Caenorhabditis japonica CJA18173 I
CRE00068 Caenorhabditis remanei CRE00068 I
DICVIV_12463 Dictyocaulus viviparus DICVIV_12463 I
DME_0000476501 Dracunculus medinensis DME_0000476501 I
EVEC_0000906601 Enterobius vermicularis EVEC_0000906601 I
HCOI00972500 Haemonchus contortus HCOI00972500 I
HPBE_0001596301 Heligmosomoides bakeri HPBE_0001596301 I
LOAG_05928 Loa loa LOAG_05928 I
NBR_0000581401 Nippostrongylus brasiliensis NBR_0000581401 I
nDi.2.2.2.g05062 Dirofilaria immitis nDi.2.2.2.g05062 I
RSKR_0000680500 Rhabditophanes kr3021 RSKR_0000680500 I
mnm-2 Caenorhabditis elegans WBGene00003380 D
WBGene00238816 Onchocerca volvulus WBGene00238816 I