CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_80340
(
Mucor circinelloides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genewise1.C_80340
T138851_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RO3G_05801
M01434_2.00
Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN
PBM
Najafabadi et al.(2015a)
pTH10221
0.792
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_80340
C2H2 ZF
75
97
YSCPYCSKGFSRPSSLRIHTYSH
estExt_Genewise1.C_80340
C2H2 ZF
103
127
FECPEAGCSRKFSVQSNMRRHLRVH
Links
Other
C2H2 ZF
family TFs
Other
Mucor circinelloides
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_pg.C_10568
Mucor circinelloides
estExt_fgeneshMC_pg.C_10568
I
0.774
GLOINDRAFT_221110
Rhizophagus irregularis
GLOINDRAFT_221110
I
0.774
GLOINDRAFT_24118
Rhizophagus irregularis
GLOINDRAFT_24118
I
0.774
GLOINDRAFT_58638
Rhizophagus irregularis
GLOINDRAFT_58638
I
0.774
gw1.1.1257.1
Mucor circinelloides
gw1.1.1257.1
I
0.768
gw1.15.181.1
Phycomyces blakesleeanus
gw1.15.181.1
I
0.803
gw1.23.155.1
Phycomyces blakesleeanus
gw1.23.155.1
I
0.768
gw1.25.121.1
Phycomyces blakesleeanus
gw1.25.121.1
I
0.757
gw1.3.584.1
Phycomyces blakesleeanus
gw1.3.584.1
I
0.758
gw1.73.24.1
Phycomyces blakesleeanus
gw1.73.24.1
I
0.757
RO3G_01826
Rhizopus oryzae
RO3G_01826
I
0.768
RO3G_05801
Rhizopus oryzae
RO3G_05801
D
0.792
RO3G_13834
Rhizopus oryzae
RO3G_13834
I
0.798