gw1.13.295.1 (Phycomyces blakesleeanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw1.13.295.1 T140037_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
orf19.7247
M10381_2.00 		Candida albicans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RIM101_01 		0.762 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.13.295.1 C2H2 ZF 17 41
gw1.13.295.1 C2H2 ZF 47 69

Links

Other C2H2 ZF family TFs
Other Phycomyces blakesleeanus TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N
cassava26784.m1 Manihot esculenta cassava26784.m1 N
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N
SCL1 Arabidopsis lyrata fgenesh2_kg.1__2335__AT1G21450.1 N
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N
GLYMA04G42090 Glycine max GLYMA04G42090 N
GLYMA13G09220 Glycine max GLYMA13G09220 N
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N
GSMUA_Achr6G11780_001 Musa acuminata GSMUA_Achr6G11780_001 N
MTR_1g029420 Medicago truncatula MTR_1g029420 N
OLONG_003002 Oryza longistaminata OLONG_003002 N
ORUFI01G42800 Oryza rufipogon ORUFI01G42800 N
Pavir.J01797 Panicum virgatum Pavir.J01797 N
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N