CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP003925
(
Lucilia cuprina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
LCUP003925
T144198_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Aef1
M03678_2.00
Drosophila melanogaster
VNWACAACAACDHN
NDHGTTGTTGTWNB
SELEX
Nitta et al.(2015)
Aef1_1
0.792
0.891
Aef1
M06107_2.00
Drosophila melanogaster
CAACWACW
WGTWGTTG
B1H
Zhu et al.(2011)
Aef1_FlyReg_FBgn0005694
0.792
0.891
Aef1
M06108_2.00
Drosophila melanogaster
RCAACAACAAC
GTTGTTGTTGY
B1H
Zhu et al.(2011)
Aef1_SANGER_5_FBgn0005694
0.792
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP003925-PA
C2H2 ZF
200
222
FQCNVCERRFRQLSTLTNHVKIH
LCUP003925-PA
C2H2 ZF
228
250
YKCNVCDKTFRQSSTLTNHLKIH
LCUP003925-PA
C2H2 ZF
256
278
FNCTYCPKHFRQLSTLTNHLKIH
LCUP003925-PA
C2H2 ZF
284
306
FECAVCKKQFRQSSTLNNHIKIH
Links
Other
C2H2 ZF
family TFs
Other
Lucilia cuprina
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aef1
Drosophila melanogaster
FBgn0005694
D
0.792
GA19053
Drosophila pseudoobscura
FBgn0079051
I
0.795
GF10284
Drosophila ananassae
FBgn0087325
I
0.795
GG16184
Drosophila erecta
FBgn0108419
I
0.795
GH16881
Drosophila grimshawi
FBgn0124352
I
0.795
GI12025
Drosophila mojavensis
FBgn0134782
I
0.795
GL24688
Drosophila persimilis
FBgn0162276
I
0.795
GM22367
Drosophila sechellia
FBgn0177237
I
0.792
GD14959
Drosophila simulans
FBgn0186631
I
0.792
GJ13294
Drosophila virilis
FBgn0200520
I
0.795
GK20477
Drosophila willistoni
FBgn0222474
I
0.795
GE19756
Drosophila yakuba
FBgn0237089
I
0.795
GE23043
Drosophila yakuba
FBgn0240244
I
0.795
MDOA004367
Musca domestica
MDOA004367
I
0.827
MESCA011217
Megaselia scalaris
MESCA011217
I
0.807
PPAI010416
Phlebotomus papatasi
PPAI010416
I
0.772