GA19053 (Drosophila pseudoobscura)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0079051 T114743_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Aef1
M03678_2.00 		Drosophila melanogaster
VNWACAACAACDHN
NDHGTTGTTGTWNB		 SELEX
Nitta et al.(2015)
Aef1_1 		0.824 0.978
Aef1
M06107_2.00 		Drosophila melanogaster
CAACWACW
WGTWGTTG		 B1H
Zhu et al.(2011)
Aef1_FlyReg_FBgn0005694 		0.824 0.978
Aef1
M06108_2.00 		Drosophila melanogaster
RCAACAACAAC
GTTGTTGTTGY		 B1H
Zhu et al.(2011)
Aef1_SANGER_5_FBgn0005694 		0.824 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0275567 C2H2 ZF 197 219
FBpp0275567 C2H2 ZF 225 247
FBpp0275567 C2H2 ZF 253 275
FBpp0275567 C2H2 ZF 281 303

Links

Other C2H2 ZF family TFs
Other Drosophila pseudoobscura TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF10284 Drosophila ananassae FBgn0087325 I 0.827
GG16184 Drosophila erecta FBgn0108419 I 0.827
GH16881 Drosophila grimshawi FBgn0124352 I 0.827
GI12025 Drosophila mojavensis FBgn0134782 I 0.827
GL24688 Drosophila persimilis FBgn0162276 I 0.827
GJ13294 Drosophila virilis FBgn0200520 I 0.827
GE19756 Drosophila yakuba FBgn0237089 I 0.827
GE23043 Drosophila yakuba FBgn0240244 I 0.827
Aef1 Drosophila melanogaster FBgn0005694 D 0.824
GM22367 Drosophila sechellia FBgn0177237 I 0.824
GD14959 Drosophila simulans FBgn0186631 I 0.824
GK20477 Drosophila willistoni FBgn0222474 I 0.822
LCUP003925 Lucilia cuprina LCUP003925 I 0.795
MDOA004367 Musca domestica MDOA004367 I 0.795
MESCA011217 Megaselia scalaris MESCA011217 I 0.777
PPAI010416 Phlebotomus papatasi PPAI010416 I 0.766