CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MESCA011217
(
Megaselia scalaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
MESCA011217
T123268_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Aef1
M03678_2.00
Drosophila melanogaster
VNWACAACAACDHN
NDHGTTGTTGTWNB
SELEX
Nitta et al.(2015)
Aef1_1
0.774
0.804
Aef1
M06107_2.00
Drosophila melanogaster
CAACWACW
WGTWGTTG
B1H
Zhu et al.(2011)
Aef1_FlyReg_FBgn0005694
0.774
0.804
Aef1
M06108_2.00
Drosophila melanogaster
RCAACAACAAC
GTTGTTGTTGY
B1H
Zhu et al.(2011)
Aef1_SANGER_5_FBgn0005694
0.774
0.804
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MESCA011217-PA
C2H2 ZF
116
138
FQCHVCERKFRQLSTLTNHVKIH
MESCA011217-PA
C2H2 ZF
144
166
YKCSICEKRFRQSSTLTNHLKIH
MESCA011217-PA
C2H2 ZF
172
194
FKCTYCLKLFRQLSTLTNHLKIH
MESCA011217-PA
C2H2 ZF
200
222
FECAVCKKQFRQSSTLNNHIKIH
Links
Other
C2H2 ZF
family TFs
Other
Megaselia scalaris
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LCUP003925
Lucilia cuprina
LCUP003925
I
0.807
MDOA004367
Musca domestica
MDOA004367
I
0.807
GK20477
Drosophila willistoni
FBgn0222474
I
0.780
GA19053
Drosophila pseudoobscura
FBgn0079051
I
0.777
GF10284
Drosophila ananassae
FBgn0087325
I
0.777
GG16184
Drosophila erecta
FBgn0108419
I
0.777
GH16881
Drosophila grimshawi
FBgn0124352
I
0.777
GI12025
Drosophila mojavensis
FBgn0134782
I
0.777
GL24688
Drosophila persimilis
FBgn0162276
I
0.777
GJ13294
Drosophila virilis
FBgn0200520
I
0.777
GE19756
Drosophila yakuba
FBgn0237089
I
0.777
GE23043
Drosophila yakuba
FBgn0240244
I
0.777
PPAI010416
Phlebotomus papatasi
PPAI010416
I
0.775
Aef1
Drosophila melanogaster
FBgn0005694
D
0.774
GM22367
Drosophila sechellia
FBgn0177237
I
0.774
GD14959
Drosophila simulans
FBgn0186631
I
0.774