osr2.S (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-6254720 T145555_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.827 1.000
Osr1
M00144_2.00 		Mus musculus
NVCTHCYNN
NNRGDAGBN		 PBM
Badis et al.(2009)
Osr1_3033 		0.811 0.986
Osr1
M01174_2.00 		Mus musculus
GCTACYGT
ACRGTAGC		 PBM
Lambert et al.(2019)
pTH5339 		0.811 0.986
OSR1
M04477_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX 		0.811 0.986
OSR1
M04478_2.00 		Homo sapiens
NGCTACYGTD
HACRGTAGCN		 SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX 		0.811 0.986
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI08580 C2H2 ZF 172 194
AAI08580 C2H2 ZF 200 222
AAI08580 C2H2 ZF 228 250

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003072.1 Alligator sinensis Alligator_sinensis_CCG003072.1 I
ENSACAG00000003946 Anolis carolinensis ENSACAG00000003946 I
ENSAMEG00000016347 Ailuropoda melanoleuca ENSAMEG00000016347 I
IRF9 Bos taurus ENSBTAG00000005816 I
ENSBTAP00000044267-D1 Bos grunniens ENSBTAP00000044267-D1 I
IRF9 Canis familiaris ENSCAFG00000012007 I
IRF9 Callithrix jacchus ENSCJAG00000007065 I
ENSCSAG00000016071 Chlorocebus sabaeus ENSCSAG00000016071 I
IRF9 Equus caballus ENSECAG00000024429 I
IRF9 Felis catus ENSFCAG00000018849 I
IRF9 Homo sapiens ENSG00000213928 D
irf9 Gasterosteus aculeatus ENSGACG00000001697 I
IRF9 Gorilla gorilla ENSGGOG00000016046 I
ENSGMOG00000002167 Gadus morhua ENSGMOG00000002167 I
IRF9 Loxodonta africana ENSLAFG00000026182 I
ENSMEUG00000010784 Macropus eugenii ENSMEUG00000010784 I
IRF9 Myotis lucifugus ENSMLUG00000025255 I
ENSMMUG00000012474 Macaca mulatta ENSMMUG00000012474 I
IRF9 Monodelphis domestica ENSMODG00000003368 I
ENSMPUG00000005961 Mustela putorius furo ENSMPUG00000005961 I
Irf9 Mus musculus ENSMUSG00000002325 D
ENSNLEG00000015294 Nomascus leucogenys ENSNLEG00000015294 I
ENSOARG00000019201 Ovis aries ENSOARG00000019201 I
IRF9 Oryctolagus cuniculus ENSOCUG00000028186 I
IRF9 Otolemur garnettii ENSOGAG00000026670 I
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I
IRF9 Ochotona princeps ENSOPRG00000018909 D
irf9 Oryzias latipes ENSORLG00000013335 I
ENSP00000380073 Macaca fascicularis ENSP00000380073 I
IRF9 Procavia capensis ENSPCAG00000015500 I
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I
ENSPPYG00000005686 Pongo abelii ENSPPYG00000005686 I
IRF9 Pan troglodytes ENSPTRG00000034494 I
IRF9 Pteropus vampyrus ENSPVAG00000007716 I
Irf9 Rattus norvegicus ENSRNOG00000019478 I
ENSSHAG00000001872 Sarcophilus harrisii ENSSHAG00000001872 I
IRF9 Sus scrofa ENSSSCG00000002002 D
ENSSTOG00000023450 Ictidomys tridecemlineatus ENSSTOG00000023450 I
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I
irf9 Takifugu rubripes ENSTRUG00000017722 I
ENSTSYG00000007445 Tarsius syrichta ENSTSYG00000007445 I
IRF9 Tursiops truncatus ENSTTRG00000008624 I
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I
Myotis_brandtii_IRF9_10003711 Myotis brandtii Myotis_brandtii_IRF9_10003711 I
Ogr03980 Ophisaurus gracilis Ogr03980 I
Pvit_14926 Pogona vitticeps Pvit_14926 I