13715_YKL062W (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 13715_YKL062W T145919_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN4
M00032_2.00 		Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN		 PBM
Badis et al.(2008)
MSN4_2121 		0.827 1.000
MSN4
M07462_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1 		0.827 1.000
MSN4
M08533_2.00 		Saccharomyces cerevisiae
CCCCT
AGGGG		 Misc
DeBoer et al.(2011)
YKL062W_518 		0.827 1.000
KLLA0_F26961g
M01039_2.00 		Kluyveromyces lactis
CYCCYTD
HARGGRG		 PBM
Siggers et al.(2014)
KLLA0F29691gKlac 		0.787 0.826
MSN2
M00036_2.00 		Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN		 PBM
Badis et al.(2008)
MSN2_2101 		0.781 0.761
MSN2
M07466_2.00 		Saccharomyces cerevisiae
CCCCY
RGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1 		0.781 0.761
MSN2
M08538_2.00 		Saccharomyces cerevisiae
NHYCCKN
NMGGRDN		 Misc
DeBoer et al.(2011)
YMR037C_1380 		0.781 0.761
MSN2
M10399_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MSN2_Q4 		0.781 0.761
CAGL0M13189g
M01034_2.00 		Candida glabrata
MYCCBBDNN
NNHVVGGRK		 PBM
Siggers et al.(2014)
CAGL0M13189gCgla 		0.774 0.891
CaO19.4752
M01035_2.00 		Candida albicans
VCCCCYDNNN
NNNHRGGGGB		 PBM
Siggers et al.(2014)
Msn4_orf19.4752Calb 		0.761 0.783
CAGL0F05995g
M01032_2.00 		Candida glabrata
NYCCYYNN
NNRRGGRN		 PBM
Siggers et al.(2014)
CAGL0F05995gCgla 		0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
13715_YKL062W C2H2 ZF 574 597
13715_YKL062W C2H2 ZF 603 625

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF354A Bos taurus ENSBTAG00000006428 I
ZNF354A Canis familiaris ENSCAFG00000031000 I
ZNF354A Callithrix jacchus ENSCJAG00000012077 I
ENSCSAG00000008589 Chlorocebus sabaeus ENSCSAG00000008589 I
ENSDNOG00000043806 Dasypus novemcinctus ENSDNOG00000043806 I
Zfp354a Dipodomys ordii ENSDORG00000009396 I
ZNF354A Equus caballus ENSECAG00000012431 I
ENSEEUG00000008362 Erinaceus europaeus ENSEEUG00000008362 I
ZNF354A Felis catus ENSFCAG00000023911 I
ZNF354A Homo sapiens ENSG00000169131 D
ZNF354A Gorilla gorilla ENSGGOG00000002534 I
ZNF354A Loxodonta africana ENSLAFG00000002909 I
ZNF354A Microcebus murinus ENSMICG00000006390 I
ZNF354A Myotis lucifugus ENSMLUG00000013294 I
ENSMMUG00000008975 Macaca mulatta ENSMMUG00000008975 I
ENSMPUG00000000732 Mustela putorius furo ENSMPUG00000000732 I
Zfp354a Mus musculus ENSMUSG00000020364 I
ENSNLEG00000001410 Nomascus leucogenys ENSNLEG00000001410 I
ZNF354A Oryctolagus cuniculus ENSOCUG00000029378 I
ZNF354A Otolemur garnettii ENSOGAG00000024624 I
ZNF354A Ochotona princeps ENSOPRG00000017155 I
ENSP00000300870-D85 Bos grunniens ENSP00000300870-D85 I
ENSPANG00000013855 Papio anubis ENSPANG00000013855 I
ENSPPYG00000016111 Pongo abelii ENSPPYG00000016111 I
ZNF354A Pan troglodytes ENSPTRG00000017606 I
ZNF354A Pteropus vampyrus ENSPVAG00000016750 I
Zfp354a Rattus norvegicus ENSRNOG00000003634 I
ENSSTOG00000024118 Ictidomys tridecemlineatus ENSSTOG00000024118 I
ZNF354A Tursiops truncatus ENSTTRG00000010631 I
Myotis_brandtii_ZNF354A_10002378 Myotis brandtii Myotis_brandtii_ZNF354A_10002378 I