chr4.CM0042.1850.nd (Lotus japonicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 chr4.CM0042.1850.nd T146059_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0042.1850.nd C2H2 ZF 14 35
chr4.CM0042.1850.nd C2H2 ZF 36 59

Links

Other C2H2 ZF family TFs
Other Lotus japonicus TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEPI008243 Anopheles epiroticus AEPI008243 I
ANCDUO_01775 Ancylostoma duodenale ANCDUO_01775 I
A_00975 Schistosoma haematobium A_00975 I
Brh_R010078 Buceros rhinoceros Brh_R010078 I
CRE30241 Caenorhabditis remanei CRE30241 I
D915_05491 Fasciola hepatica D915_05491 I
ENSACAG00000003721 Anolis carolinensis ENSACAG00000003721 I
CABZ01017151.1 Danio rerio ENSDARG00000104156 I
PBX1 Homo sapiens ENSG00000185630 D
ENSGMOG00000006428 Gadus morhua ENSGMOG00000006428 I
ENSLACG00000016442 Latimeria chalumnae ENSLACG00000016442 I
ENSLOCG00000006841 Lepisosteus oculatus ENSLOCG00000006841 I
ENSMEUG00000002971 Macropus eugenii ENSMEUG00000002971 I
ENSMEUG00000006330 Macropus eugenii ENSMEUG00000006330 I
Pbx1 Mus musculus ENSMUSG00000052534 D
PBX4 Oryctolagus cuniculus ENSOCUG00000029208 I
PBX1 Oryzias latipes ENSORLG00000016702 I
ENSSTOG00000013679 Ictidomys tridecemlineatus ENSSTOG00000013679 I
ENSTBEG00000007209 Tupaia belangeri ENSTBEG00000007209 N
PBX3 Tupaia belangeri ENSTBEG00000016855 I
HmN_000400100 Hymenolepis microstoma HmN_000400100 I
M7I_7350 Glarea lozoyensis M7I_7350 N
MDOA002143 Musca domestica MDOA002143 I
MESCA000707 Megaselia scalaris MESCA000707 I
MYCFIDRAFT_76128 Pseudocercospora fijiensis MYCFIDRAFT_76128 I
Myotis_brandtii_MIMI_L668_10004071 Myotis brandtii Myotis_brandtii_MIMI_L668_10004071 I
Myotis_brandtii_MIMI_R196_10004074 Myotis brandtii Myotis_brandtii_MIMI_R196_10004074 I
O9G_001635 Rozella allomycis O9G_001635 N
Ogr15448 Ophisaurus gracilis Ogr15448 I
PPAI000859 Phlebotomus papatasi PPAI000859 I
PXEA_0001880101 Protopolystoma xenopodis PXEA_0001880101 I
SVUK_0000462001 Strongylus vulgaris SVUK_0000462001 I
UCRNP2_7717 Neofusicoccum parvum UCRNP2_7717 I