CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_MIMI_R196_10004074
(
Myotis brandtii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Myotis_brandtii_MIMI_R196_10004074
T226409_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pbx1
M09213_2.00
Mus musculus
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A
0.603
0.314
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_MIMI_R196_10004074
Homeodomain
147
181
RIQRRKFTQVQVEELENMYKHNPYPDTITRNDVEK
Links
Other
Homeodomain
family TFs
Other
Myotis brandtii
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Myotis_brandtii_MIMI_L668_10004071
Myotis brandtii
Myotis_brandtii_MIMI_L668_10004071
I
0.860
MhA1_Contig138.frz3.gene24
Meloidogyne hapla
MhA1_Contig138.frz3.gene24
I
0.715
AEPI008243
Anopheles epiroticus
AEPI008243
I
0.704
ANCCEY_11361
Ancylostoma ceylanicum
ANCCEY_11361
I
0.690
MESCA000707
Megaselia scalaris
MESCA000707
I
0.675
MDOA002143
Musca domestica
MDOA002143
I
0.675
PPAI000859
Phlebotomus papatasi
PPAI000859
I
0.675
ACOC_0000393801
Angiostrongylus costaricensis
ACOC_0000393801
I
0.674
PXEA_0001880101
Protopolystoma xenopodis
PXEA_0001880101
I
0.668
ENSMEUG00000002971
Macropus eugenii
ENSMEUG00000002971
I
0.654
ENSMEUG00000006330
Macropus eugenii
ENSMEUG00000006330
I
0.654
ENSSTOG00000013679
Ictidomys tridecemlineatus
ENSSTOG00000013679
I
0.654
Brh_R010078
Buceros rhinoceros
Brh_R010078
I
0.654
D915_05491
Fasciola hepatica
D915_05491
I
0.654
ENSDORG00000008440
Dipodomys ordii
ENSDORG00000008440
N
0.650
Lus10025232.g
Linum usitatissimum
Lus10025232.g
N
0.635
nkx2-4
Xenopus tropicalis
XB-GENE-487481
I
0.632
HmN_000400100
Hymenolepis microstoma
HmN_000400100
I
0.630
BTMF_0000212801
Brugia timori
BTMF_0000212801
I
0.625
ORUFI07G17770
Oryza rufipogon
ORUFI07G17770
N
0.622
ENSACAG00000003721
Anolis carolinensis
ENSACAG00000003721
I
0.621
PBX3
Tupaia belangeri
ENSTBEG00000016855
I
0.621
SVUK_0000462001
Strongylus vulgaris
SVUK_0000462001
I
0.621
ENSTBEG00000007209
Tupaia belangeri
ENSTBEG00000007209
N
0.620
L892_g18619
Steinernema scapterisci
L892_g18619
N
0.619
MYCFIDRAFT_76128
Pseudocercospora fijiensis
MYCFIDRAFT_76128
I
0.612
fgenesh1_pg.C_scaffold_1001003
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_1001003
I
0.612
ENSMEUG00000003167
Macropus eugenii
ENSMEUG00000003167
I
0.608
UCRNP2_7717
Neofusicoccum parvum
UCRNP2_7717
I
0.607
CABZ01017151.1
Danio rerio
ENSDARG00000104156
I
0.603
PBX1
Homo sapiens
ENSG00000185630
D
0.603
ENSGMOG00000006428
Gadus morhua
ENSGMOG00000006428
I
0.603
ENSLACG00000016442
Latimeria chalumnae
ENSLACG00000016442
I
0.603
ENSLOCG00000006841
Lepisosteus oculatus
ENSLOCG00000006841
I
0.603
Pbx1
Mus musculus
ENSMUSG00000052534
D
0.603
PBX1
Oryzias latipes
ENSORLG00000016702
I
0.603
Ogr15448
Ophisaurus gracilis
Ogr15448
I
0.603
A_00975
Schistosoma haematobium
A_00975
I
0.603
PBX4
Oryctolagus cuniculus
ENSOCUG00000029208
I
0.602
AMIN005749
Anopheles minimus
AMIN005749
I
0.602
nkx3.2
Takifugu rubripes
ENSTRUG00000014438
I
0.600
PK01458.1
Cannabis sativa
PK01458.1
N
0.599