AATE020159 (Anopheles atroparvus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AATE020159 T147376_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.814 0.956
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.814 0.956
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.814 0.956
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.814 0.956
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.792 0.833
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.792 0.833
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.792 0.833
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.792 0.833
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.786 0.895
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.786 0.895
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.786 0.895
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.774 0.825
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.774 0.825
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.774 0.825
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AATE020159-PA C2H2 ZF 228 250
AATE020159-PA C2H2 ZF 259 281
AATE020159-PA C2H2 ZF 285 307
AATE020159-PA C2H2 ZF 313 335
AATE020159-PA C2H2 ZF 341 362

Links

Other C2H2 ZF family TFs
Other Anopheles atroparvus TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000009090 Ailuropoda melanoleuca ENSAMEG00000009090 I
ZNF354A Bos taurus ENSBTAG00000006428 I
ZNF354B Canis familiaris ENSCAFG00000029114 I
ZNF354A Canis familiaris ENSCAFG00000031000 I
ZNF354A Callithrix jacchus ENSCJAG00000012077 I
ZNF354B Callithrix jacchus ENSCJAG00000018848 I
ZNF354B Cavia porcellus ENSCPOG00000002227 I
ENSCSAG00000008583 Chlorocebus sabaeus ENSCSAG00000008583 I
ENSCSAG00000008589 Chlorocebus sabaeus ENSCSAG00000008589 I
ZNF354B Dasypus novemcinctus ENSDNOG00000031129 I
ENSDNOG00000043806 Dasypus novemcinctus ENSDNOG00000043806 I
Zfp354a Dipodomys ordii ENSDORG00000009396 I
ZNF354B Equus caballus ENSECAG00000012028 I
ZNF354A Equus caballus ENSECAG00000012431 I
ENSEEUG00000008362 Erinaceus europaeus ENSEEUG00000008362 I
ZNF354B Felis catus ENSFCAG00000022066 I
ZNF354A Felis catus ENSFCAG00000023911 I
ZNF354A Homo sapiens ENSG00000169131 D
ZNF354B Homo sapiens ENSG00000178338 D
ZNF354B Gorilla gorilla ENSGGOG00000000628 I
ZNF354A Gorilla gorilla ENSGGOG00000002534 I
ZNF354A Loxodonta africana ENSLAFG00000002909 I
ZNF354A Microcebus murinus ENSMICG00000006390 I
ZNF354A Myotis lucifugus ENSMLUG00000013294 I
ENSMMUG00000008975 Macaca mulatta ENSMMUG00000008975 I
ZNF354B Macaca mulatta ENSMMUG00000008976 I
ENSMPUG00000000728 Mustela putorius furo ENSMPUG00000000728 I
ENSMPUG00000000732 Mustela putorius furo ENSMPUG00000000732 I
Zfp354a Mus musculus ENSMUSG00000020364 I
ENSNLEG00000001410 Nomascus leucogenys ENSNLEG00000001410 I
ENSNLEG00000001411 Nomascus leucogenys ENSNLEG00000001411 I
ENSOARG00000006794 Ovis aries ENSOARG00000006794 I
ENSOCUG00000029238 Oryctolagus cuniculus ENSOCUG00000029238 I
ZNF354A Oryctolagus cuniculus ENSOCUG00000029378 I
ZNF354A Otolemur garnettii ENSOGAG00000024624 I
ZNF354B Otolemur garnettii ENSOGAG00000027501 I
ZNF354A Ochotona princeps ENSOPRG00000017155 I
ENSP00000300870-D85 Bos grunniens ENSP00000300870-D85 I
ENSP00000327143 Macaca fascicularis ENSP00000327143 I
ENSPANG00000013252 Papio anubis ENSPANG00000013252 I
ENSPANG00000013855 Papio anubis ENSPANG00000013855 I
ENSPPYG00000016111 Pongo abelii ENSPPYG00000016111 I
ENSPPYG00000016113 Pongo abelii ENSPPYG00000016113 I
ZNF354A Pan troglodytes ENSPTRG00000017606 I
ZNF354B Pan troglodytes ENSPTRG00000017609 I
ZNF354B Pteropus vampyrus ENSPVAG00000007675 I
ZNF354A Pteropus vampyrus ENSPVAG00000016750 I
Zfp354a Rattus norvegicus ENSRNOG00000003634 I
ENSSTOG00000024118 Ictidomys tridecemlineatus ENSSTOG00000024118 I
ZNF354A Tursiops truncatus ENSTTRG00000010631 I