NBR_0000225801 (Nippostrongylus brasiliensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 NBR_0000225801 T155070_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-2
M01866_2.00 		Caenorhabditis elegans
NYWGRAMCHN
NDGKTYCWRN		 PBM
Weirauch et al.(2014)
pTH9049 		0.788 0.932
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0000225801-mRNA-1 C2H2 ZF 55 76
NBR_0000225801-mRNA-1 C2H2 ZF 82 103

Links

Other C2H2 ZF family TFs
Other Nippostrongylus brasiliensis TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG14093 Caenorhabditis briggsae CBG14093 I
CBN04683 Caenorhabditis brenneri CBN04683 N
CBN06404 Caenorhabditis brenneri CBN06404 N
CBN25393 Caenorhabditis brenneri CBN25393 I
CJA05504 Caenorhabditis japonica CJA05504 N
CJA18701 Caenorhabditis japonica CJA18701 I
CRE00458 Caenorhabditis remanei CRE00458 I
CRE08255 Caenorhabditis remanei CRE08255 I
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I
L596_g623 Steinernema carpocapsae L596_g623 I
SMUV_0000188601 Syphacia muris SMUV_0000188601 I
lsy-2 Caenorhabditis elegans WBGene00003087 D