SMUV_0001104401 (Syphacia muris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SMUV_0001104401 T156460_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.778 0.833
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.778 0.833
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.778 0.833
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0001104401-mRNA-1 C2H2 ZF 575 597
SMUV_0001104401-mRNA-1 C2H2 ZF 603 625
SMUV_0001104401-mRNA-1 C2H2 ZF 631 653
SMUV_0001104401-mRNA-1 C2H2 ZF 659 681
SMUV_0001104401-mRNA-1 C2H2 ZF 687 708

Links

Other C2H2 ZF family TFs
Other Syphacia muris TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004255 Aedes aegypti AAEL004255 I 0.778
AAEL013770 Aedes aegypti AAEL013770 I 0.778
AATE010559 Anopheles atroparvus AATE010559 I 0.778
ACEP26221 Atta cephalotes ACEP26221 I 0.781
ACOM039487 Anopheles coluzzii ACOM039487 I 0.778
ACUA020082 Anopheles culicifacies ACUA020082 I 0.778
ADAC005262 Anopheles darlingi ADAC005262 I 0.778
AFAF006673 Anopheles farauti AFAF006673 I 0.778
AFUN002606 Anopheles funestus AFUN002606 I 0.778
AGAP006592 Anopheles gambiae AGAP006592 I 0.778
AMEC005588 Anopheles melas AMEC005588 I 0.778
AMEM000073 Anopheles merus AMEM000073 I 0.778
ASIS005657 Anopheles sinensis ASIS005657 I 0.778
ASU_05469 Ascaris suum ASU_05469 I 0.805
BGIBMGA000319 Bombyx mori BGIBMGA000319 I 0.778
Bm3574 Brugia malayi Bm3574 I 0.793
BTMF_0000836601 Brugia timori BTMF_0000836601 I 0.793
BXY_0993100 Bursaphelenchus xylophilus BXY_0993100 I 0.762
Cflo_04377--XP_391847.3_APIME Camponotus floridanus Cflo_04377--XP_391847.3_APIME I 0.781
CLEC009125 Cimex lectularius CLEC009125 I 0.781
CPIJ007425 Culex quinquefasciatus CPIJ007425 I 0.778
CpipJ_CPIJ007425 Culex pipiens CpipJ_CPIJ007425 I 0.778
D917_07972 Trichinella nativa D917_07972 I 0.776
D918_01175 Trichuris suis D918_01175 I 0.764
DAPPUDRAFT_319330 Daphnia pulex DAPPUDRAFT_319330 I 0.779
DME_0000608401 Dracunculus medinensis DME_0000608401 I 0.783
EFV52614 Trichinella spiralis EFV52614 I 0.773
EVEC_0000549701 Enterobius vermicularis EVEC_0000549701 I 0.827
Blimp-1 Drosophila melanogaster FBgn0035625 D 0.778
GF23985 Drosophila ananassae FBgn0100979 I 0.778
GG15278 Drosophila erecta FBgn0107530 I 0.778
GH16462 Drosophila grimshawi FBgn0123933 I 0.778
GM14713 Drosophila sechellia FBgn0169634 I 0.778
GJ13412 Drosophila virilis FBgn0200637 I 0.778
GK17303 Drosophila willistoni FBgn0219302 I 0.778
GE21501 Drosophila yakuba FBgn0238758 I 0.778
GA23469 Drosophila pseudoobscura FBgn0244871 I 0.778
GB51060 Apis mellifera GB51060 I 0.781
HHAL002221-PA Halyomorpha halys HHAL002221-PA I 0.781
HMEL007072 Heliconius melpomene HMEL007072 I 0.778
KGM_16647 Danaus plexippus KGM_16647 I 0.778
L596_g21750 Steinernema carpocapsae L596_g21750 I 0.771
L798_14234 Zootermopsis nevadensis L798_14234 I 0.779
L889_g7623 Steinernema feltiae L889_g7623 I 0.771
L892_g2443 Steinernema scapterisci L892_g2443 I 0.771
L893_g23908 Steinernema glaseri L893_g23908 I 0.771
L898_g18820 Steinernema monticolum L898_g18820 I 0.771
LCUP008191 Lucilia cuprina LCUP008191 I 0.778
LDEC016433 Leptinotarsa decemlineata LDEC016433 I 0.762
LOAG_11444 Loa loa LOAG_11444 I 0.793
MCINX009345 Melitaea cinxia MCINX009345 I 0.778
MDOA000384 Musca domestica MDOA000384 I 0.778
nDi.2.2.2.g10740 Dirofilaria immitis nDi.2.2.2.g10740 I 0.793
nLs.2.1.2.g09168 Litomosoides sigmodontis nLs.2.1.2.g09168 I 0.789
nOo.2.0.1.g07043 Onchocerca ochengi nOo.2.0.1.g07043 I 0.793
NV12817 Nasonia vitripennis NV12817 I 0.769
PHUM607020 Pediculus humanus PHUM607020 I 0.769
Ppa-blmp-1 Pristionchus pacificus PPA04977 N 0.762
PPAI008567 Phlebotomus papatasi PPAI008567 I 0.778
RPRC001983 Rhodnius prolixus RPRC001983 I 0.781
scaffold607-EXSNAP2012.2 Pristionchus exspectatus scaffold607-EXSNAP2012.2 N 0.762
SINV14078 Solenopsis invicta SINV14078 I 0.781
SMAR011793 Strigamia maritima SMAR011793 I 0.779
SPAL_0000884500 Strongyloides papillosus SPAL_0000884500 I 0.762
SSTP_0000757300 Strongyloides stercoralis SSTP_0000757300 I 0.762
SVE_1713000 Strongyloides venezuelensis SVE_1713000 I 0.762
TC014741 Tribolium castaneum TC014741 I 0.767
TCLT_0000472801 Thelazia callipaeda TCLT_0000472801 I 0.798
TCNE_0001220201 Toxocara canis TCNE_0001220201 I 0.807
TMUE_s0064002300 Trichuris muris TMUE_s0064002300 I 0.764
TTRE_0000156401 Trichuris trichiura TTRE_0000156401 I 0.764
WBGene00238199 Onchocerca volvulus WBGene00238199 I 0.793
WUBG_04696 Wuchereria bancrofti WUBG_04696 I 0.793