TCLT_0000472801 (Thelazia callipaeda)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 TCLT_0000472801 T157719_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.779 0.851
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.779 0.851
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCLT_0000472801-mRNA-1 C2H2 ZF 623 645
TCLT_0000472801-mRNA-1 C2H2 ZF 651 673
TCLT_0000472801-mRNA-1 C2H2 ZF 679 701
TCLT_0000472801-mRNA-1 C2H2 ZF 707 729
TCLT_0000472801-mRNA-1 C2H2 ZF 735 756

Links

Other C2H2 ZF family TFs
Other Thelazia callipaeda TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_029500 Albugo laibachii ALNC14_029500 N
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I
estExt_fgenesh1_kg.C_3051400005 Phytophthora capsici estExt_fgenesh1_kg.C_3051400005 I
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I
F443_16339 Phytophthora parasitica F443_16339 N
F443_19686 Phytophthora parasitica F443_19686 I
F443_20671 Phytophthora parasitica F443_20671 I
F443_20703 Phytophthora parasitica F443_20703 I
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I
fgenesh_scip_prom.28083.1909 Phytophthora lateralis fgenesh_scip_prom.28083.1909 I
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I
fgenesh_scip_prom.46568.9768 Phytophthora kernoviae fgenesh_scip_prom.46568.9768 N
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I
maker-pir_contig_435-fgenesh-gene-0.7 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.7 I
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N
maker-pir_contig_524-snap-gene-0.12 Pythium irregulare maker-pir_contig_524-snap-gene-0.12 N
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I
maker-piw_contig_1647-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1647-fgenesh-gene-0.1 N
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I
maker-pve_contig_364-fgenesh-gene-0.6 Pythium vexans maker-pve_contig_364-fgenesh-gene-0.6 N
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I
Phyra80922 Phytophthora ramorum Phyra80922 N
Phyra80925 Phytophthora ramorum Phyra80925 N
Phyra80938 Phytophthora ramorum Phyra80938 D
Phyra87784 Phytophthora ramorum Phyra87784 I
Phyra95260 Phytophthora ramorum Phyra95260 I
Physo132941 Phytophthora sojae Physo132941 I
Physo132943 Phytophthora sojae Physo132943 I
Physo132945 Phytophthora sojae Physo132945 I
Physo132946 Phytophthora sojae Physo132946 I
Physo132965 Phytophthora sojae Physo132965 N
PITG_14400 Phytophthora infestans PITG_14400 I
PITG_18789 Phytophthora infestans PITG_18789 I
PYU1_G002831 Pythium ultimum PYU1_G002831 N
PYU1_G002833 Pythium ultimum PYU1_G002833 I
PYU1_G002849 Pythium ultimum PYU1_G002849 I
PYU1_G003089 Pythium ultimum PYU1_G003089 N