CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig653.frz3.gene3
(
Meloidogyne hapla
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
MhA1_Contig653.frz3.gene3
T159652_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig653.frz3.gene3
C2HC ZF
11
39
RCTYPGCDGRGHVNSSRNSHRSLSGCPVA
Links
Other
C2HC ZF
family TFs
Other
Meloidogyne hapla
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP14860
Atta cephalotes
ACEP14860
N
0.724
ASIM_0001177701
Anisakis simplex
ASIM_0001177701
N
0.793
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf19173-processed-gene-0.0
N
0.824
EEL_0001074901
Elaeophora elaphi
EEL_0001074901
N
0.793
GPLIN_000819200
Globodera pallida
GPLIN_000819200
N
0.897
GPUH_0000809301
Gongylonema pulchrum
GPUH_0000809301
N
0.793
GPUH_0002358201
Gongylonema pulchrum
GPUH_0002358201
N
0.737
L892_g7302
Steinernema scapterisci
L892_g7302
N
0.759
LOAG_15212
Loa loa
LOAG_15212
N
0.793
nAv.1.0.1.g03526
Acanthocheilonema viteae
nAv.1.0.1.g03526
N
0.793
nOo.2.0.1.g06132
Onchocerca ochengi
nOo.2.0.1.g06132
N
0.793
Ocbimv22011176m.g
Octopus bimaculoides
Ocbimv22011176m.g
N
0.724
OESDEN_08744
Oesophagostomum dentatum
OESDEN_08744
N
0.793
Ogr10463
Ophisaurus gracilis
Ogr10463
N
0.793
PEQ_0000073901
Parascaris equorum
PEQ_0000073901
N
0.793
RPRC011887
Rhodnius prolixus
RPRC011887
N
0.759
YQE_11979
Dendroctonus ponderosae
YQE_11979
N
0.759